Evidence map›Paper›PMID 37166005›Full record

ArticleeLife2023

Using light and X-ray scattering to untangle complex neuronal orientations and validate diffusion MRI.

Miriam Menzel, David Gräßel, Ivan Rajkovic, Michael M Zeineh, Marios Georgiadis

Open access · goldAbstract read
In one paragraph

Article in eLife, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 3 countries.

Miriam MenzelDepartment of Imaging Physics, Faculty of Applied Sciences, Delft University of Technology, Delft, Netherlands.ORCID 0000-0002-6042-7490
David GräßelInstitute of Neuroscience and Medicine (INM-1), Forschungszentrum Jülich GmbH, Jülich, Germany.ORCID 0000-0003-3228-8048
Ivan RajkovicStanford Synchrotron Radiation Lightsource, SLAC National Accelerator Laboratory, Standford, United States.
Michael M Zeineh *Department of Radiology, Stanford School of Medicine, Stanford, United States.
Marios Georgiadis *Department of Radiology, Stanford School of Medicine, Stanford, United States.ORCID 0000-0003-0733-4559
Forschungszentrum Jülich · DEStanford Medicine · USSLAC National Accelerator Laboratory · US

Funding

A Synchrotron Radiation Structural Biology ResourcesP30GM133894 · NIGMS · STANFORD UNIVERSITY · PI Ritimukta Sarangi · 2020 to 2026
$43.3M
TR&D 4: Revealing Microstructure: Biophysical modeling and validation for discovery and clinical careP41EB017183 · NIBIB · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI Christopher M Collins · 2014 to 2026
$19.3M
Vervet Research Colony as a Biomedical ResourceP40OD010965 · OD · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI Matthew Jorgensen · 2012 to 2026
$14.6M
Mesoscopic Biomarkers of Neurodegeneration with Diffusion MRIR01NS088040 · NINDS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI FIEREMANS, ELS, NOVIKOV, DMITRY S · 2014 to 2023
$5.2M
Iron as an Imaging Biomarker for Inflammation in ADR01AG061120 · NIA · STANFORD UNIVERSITY · PI ZEINEH, MICHAEL M · 2019 to 2023
$3.5M
Postnatal Development of Cortical Receptors and White Matter TractsR01MH092311 · NIMH · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI WOODS, ROGER P · 2012 to 2016
$2.2M
PILATUS3 X 1M X-ray detectorS10OD021512 · OD · STANFORD UNIVERSITY · PI WEIS, WILLIAM I · 2016 to 2016
$550k
NIA NIH HHS R01 AG061120NIBIB NIH HHS P41 EB017183NIGMS NIH HHS P30 GM133894NIH HHS P40 OD010965NIH HHS S10 OD021512NIMH NIH HHS R01 MH092311NINDS NIH HHS R01 NS088040
6 · The paper itself

Abstract

Disentangling human brain connectivity requires an accurate description of nerve fiber trajectories, unveiled via detailed mapping of axonal orientations. However, this is challenging because axons can cross one another on a micrometer scale. Diffusion magnetic resonance imaging (dMRI) can be used to infer axonal connectivity because it is sensitive to axonal alignment, but it has limited spatial resolution and specificity. Scattered light imaging (SLI) and small-angle X-ray scattering (SAXS) reveal axonal orientations with microscopic resolution and high specificity, respectively. Here, we apply both scattering techniques on the same samples and cross-validate them, laying the groundwork for ground-truth axonal orientation imaging and validating dMRI. We evaluate brain regions that include unidirectional and crossing fibers in human and vervet monkey brain sections. SLI and SAXS quantitatively agree regarding in-plane fiber orientations including crossings, while dMRI agrees in the majority of voxels with small discrepancies. We further use SAXS and dMRI to confirm theoretical predictions regarding SLI determination of through-plane fiber orientations. Scattered light and X-ray imaging can provide quantitative micrometer 3D fiber orientations with high resolution and specificity, facilitating detailed investigations of complex fiber architecture in the animal and human brain.

Indexed as

BrainDiffusion Magnetic Resonance ImagingAnimalsChlorocebus aethiopsHumansImage Processing, Computer-AssistedScattering, Small AngleX-Ray DiffractionX-Raysbrain connectivitycorona radiatahumanlight scatteringneuroimagingneurosciencevervet monkeyX-ray scattering

Identifiers

PMID37166005
PMCPMC10259419
OpenAlexW4376132316

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.