Evidence map›Paper›PMID 37165293›Full record

ArticleAmino acids2023

Development of peptide-based biosensors for detecting cross-linking and deamidation activities of transglutaminases.

Hideki Tatsukawa, Ruriko Aoyama, Kiyotaka Hitomi

Abstract read
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In one paragraph

Article in Amino acids, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Hideki TatsukawaCellular Biochemistry Lab., Graduate School of Pharmaceutical Sciences, Nagoya University, Tokai National Higher Education and Research System, Furo-cho, Chikusa, Nagoya, 464-8601, Japan. htatsukawa@ps.nagoya-u.ac.jp.
Ruriko AoyamaCellular Biochemistry Lab., Graduate School of Pharmaceutical Sciences, Nagoya University, Tokai National Higher Education and Research System, Furo-cho, Chikusa, Nagoya, 464-8601, Japan.
Kiyotaka HitomiCellular Biochemistry Lab., Graduate School of Pharmaceutical Sciences, Nagoya University, Tokai National Higher Education and Research System, Furo-cho, Chikusa, Nagoya, 464-8601, Japan.
Nagoya University · JP

Funding

Japan Society for the Promotion of Science 19K08675Japan Society for the Promotion of Science 26292192
6 · The paper itself

Abstract

Transglutaminases (TGs) are a protein family that catalyzes isopeptide bond formation between glutamine and lysine residues of various proteins. There are eight TG isozymes in humans, and each is involved in diverse biological phenomena due to their characteristic distribution. Abnormal activity of TG1 and TG2, which are major TG isozymes, is believed to cause various diseases, such as ichthyosis and celiac disease. To elucidate TGs' mechanisms of action and develop new therapeutic strategies, it is essential to develop bioprobes that can specifically examine the activity of each TG isozyme, which has not been sufficiently studied. We previously have identified several substrate peptide sequences containing Gln residues for each isozyme and developed a method to detect isozyme-specific activities by incorporating a labeled substrate peptide into lysine residues of proteins. We prepared the fluorescein isothiocyanate (FITC)-labeled Gln substrate peptide (FITC-K5 and FITC-T26) and Rhodamine B-labeled Lys substrate peptide (RhoB-Kpep). Each TG reaction specifically cross-linked these probe pairs, and the proximity of FITC and Rhodamine B significantly decreased the fluorescence intensity of FITC depending on the concentration and reaction time of each TG. In this study, we developed a peptide-based biosensor that quickly and easily measures TG isozyme-specific activity. This probe is expected to be helpful in elucidating TG's physiological and pathological functions and in developing compounds that modulate TG activity.

Indexed as

IsoenzymesTransglutaminasesFluoresceinFluorescein-5-isothiocyanateHumansLysinePeptidesFluoresceinFluorescein-5-isothiocyanateIsoenzymesLysinePeptidesTransglutaminasesBiosensorCross-linkFörster resonance energy transferSubstrate peptideTransglutaminase

Identifiers

PMID37165293
OpenAlexW4376132446

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.