Evidence map›Paper›PMID 37165193›Full record

ArticleNature2023

A pan-grass transcriptome reveals patterns of cellular divergence in crops.

Bruno Guillotin, Ramin Rahni, Michael Passalacqua, Mohammed Ateequr Mohammed, Xiaosa Xu, Sunil Kenchanmane Raju, Carlos Ortiz Ramírez, David Jackson, Simon C Groen, Jesse Gillis and 1 more

Open access · greenAbstract readComparative Study
In one paragraph

Article in Nature, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 84 papers.

0numbers the graph read from it
0cells of the map it votes in
84citing papers in PubMed
22.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

84 citing papers in PubMed, 143 citations in OpenAlex.

  1. Article
  2. Review
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  5. Article
  6. Genetic determinants of aerial root morphology in Sierra Mixe-derived maize.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
    Article
  7. Review
  8. Review
  9. Review
  10. Article
  11. Single-cell insights into plant growth, adaptation, and evolution.Journal of integrative plant biology · 2026
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

24 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 4 countries.

Bruno GuillotinCenter for Genomics and Systems Biology, New York University, New York, NY, USA.ORCID 0000-0002-0117-2512
Ramin RahniCenter for Genomics and Systems Biology, New York University, New York, NY, USA.
Michael PassalacquaCold Spring Harbor Laboratory, New York, NY, USA.ORCID 0000-0002-6344-1175
Mohammed Ateequr MohammedCenter for Genomics and Systems Biology, New York University Abu Dhabi, Abu Dhabi, United Arab Emirates.
Xiaosa XuCold Spring Harbor Laboratory, New York, NY, USA.ORCID 0000-0002-3452-6751
Sunil Kenchanmane RajuCenter for Genomics and Systems Biology, New York University, New York, NY, USA.
Carlos Ortiz RamírezCenter for Genomics and Systems Biology, New York University, New York, NY, USA.ORCID 0000-0002-5166-1955
David JacksonCold Spring Harbor Laboratory, New York, NY, USA.ORCID 0000-0002-4269-7649
Simon C GroenDepartment of Nematology and Center for Plant Cell Biology, Institute for Integrative Genome Biology, University of California, Riverside, CA, USA.
Jesse GillisDepartment of Physiology, University of Toronto, Toronto, Ontario, Canada.
Kenneth D BirnbaumCenter for Genomics and Systems Biology, New York University, New York, NY, USA. ken.birnbaum@nyu.edu.ORCID 0000-0002-8423-6859
Cold Spring Harbor Laboratory · USNew York University · USNew York University Abu Dhabi · AEUniversity of California, Riverside · USUniversity of Toronto · CA

Funding

Regeneration of Complex Patterns in PlantsR35GM136362 · NIGMS · NEW YORK UNIVERSITY · PI Kenneth David Birnbaum · 2020 to 2026
$3.1M
Revealing the transcriptomic basis of neuronal identity through functional meta-analysisR01MH113005 · NIMH · COLD SPRING HARBOR LABORATORY · PI GILLIS, JESSE · 2017 to 2021
$2.4M
Heuristics to evaluate biomedical and genomic knowledge bases for validityR01LM012736 · NLM · COLD SPRING HARBOR LABORATORY · PI GILLIS, JESSE · 2017 to 2020
$1.9M
NIGMS NIH HHS R35 GM136362NIMH NIH HHS R01 MH113005NLM NIH HHS R01 LM012736
6 · The paper itself

Abstract

Different plant species within the grasses were parallel targets of domestication, giving rise to crops with distinct evolutionary histories and traits

Indexed as

Crops, AgriculturalSetaria PlantSorghumTranscriptomeZea maysBase SequenceEvolution, MolecularGene Expression Regulation, PlantPlant RootsSequence Analysis, RNASingle-Cell Gene Expression Analysis

Identifiers

PMID37165193
PMCPMC10657638
OpenAlexW4376113638

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.