Evidence map›Paper›PMID 37165176›Full record

ArticleNature metabolism2023

Human metabolome variation along the upper intestinal tract.

Jacob Folz, Rebecca Neal Culver, Juan Montes Morales, Jessica Grembi, George Triadafilopoulos, David A Relman, Kerwyn Casey Huang, Dari Shalon, Oliver Fiehn

Open access · hybridAbstract read
In one paragraph

Article in Nature metabolism, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 82 papers.

0numbers the graph read from it
0cells of the map it votes in
82citing papers in PubMed
23.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

82 citing papers in PubMed, 131 citations in OpenAlex.

  1. Prebiotic Administration to Chronic Kidney Disease Patients Modifies Their Fecal Microbiome and Host Metabolism.Journal of renal nutrition : the official journal of the Council on Renal Nutrition of the National Kidney Foundation · 2026
    Trial
  2. Trial
  3. Trial
  4. Regional organization of nutrient absorption across the small intestine.Nature reviews. Gastroenterology & hepatology · 2026
    Review
  5. Article
  6. Review
  7. Article
  8. Multi-region sampling of the human small intestine using an ingestible device.medRxiv : the preprint server for health sciences · 2026
    Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Short-Term Alcohol Consumption Is Sufficient to Disrupt Microbial Communities and the Intestinal and Circulating Metabolites in a Non-Human Primate Model.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2025
    Article
  20. Article

22 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Jacob FolzWest Coast Metabolomics Center, University of California, Davis, CA, USA.
Rebecca Neal CulverDepartment of Genetics, Stanford University School of Medicine, Stanford, CA, USA.
Juan Montes MoralesWest Coast Metabolomics Center, University of California, Davis, CA, USA.
Jessica GrembiDepartment of Medicine, Stanford University School of Medicine, Stanford, CA, USA.ORCID http://orcid.org/0000-0001-6142-4913
George TriadafilopoulosSilicon Valley Neurogastroenterology and Motility Center, Mountain View, CA, USA.ORCID http://orcid.org/0000-0002-4233-3773
David A RelmanDepartment of Medicine, Stanford University School of Medicine, Stanford, CA, USA.ORCID http://orcid.org/0000-0001-8331-1354
Kerwyn Casey HuangDepartment of Microbiology and Immunology, Stanford University School of Medicine, Stanford, CA, USA.ORCID http://orcid.org/0000-0002-8043-8138
Dari ShalonEnvivo Bio, San Francisco, CA, USA.ORCID http://orcid.org/0000-0003-2646-6215
Oliver FiehnWest Coast Metabolomics Center, University of California, Davis, CA, USA. ofiehn@ucdavis.edu.ORCID http://orcid.org/0000-0002-6261-8928
University of California, Davis · USStanford University · USChan Zuckerberg Initiative (United States) · USVA Palo Alto Health Care System · US

Funding

Systems BiologyU19AG023122 · NIA · TRANSLATIONAL GENOMICS RESEARCH INST · PI JODI A LAPIDUS · 2004 to 2026
$102.6M
A universal pipeline for functional characterization of the human microbiota at a massive scaleRM1GM135102 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI BUIE, CULLEN RICHARD, DEUTSCHBAUER, ADAM M · 2020 to 2024
$7.6M
Flaxseed effects on gut microbial metabolism and circulating inflammation-related metabolic profiles in African American and non-Hispanic white womenR01AT010216 · NCCIH · ROSWELL PARK CANCER INSTITUTE CORP · PI TANG, LI · 2018 to 2021
$1.7M
Towards a mechanistic understanding of the role of gut microbiota in postnatal growth impairmentF32DK130574 · NIDDK · STANFORD UNIVERSITY · PI GREMBI, JESSICA A. · 2022 to 2024
$171k
NCCIH NIH HHS R01 AT010216NIA NIH HHS U19 AG023122NIDDK NIH HHS F32 DK130574NIGMS NIH HHS RM1 GM135102
6 · The paper itself

Abstract

Most processing of the human diet occurs in the small intestine. Metabolites in the small intestine originate from host secretions, plus the ingested exposome

Indexed as

Fatty AcidsMetabolomeFecesFemaleHumansIntestine, SmallMaleRNA, Ribosomal, 16SFatty AcidsRNA, Ribosomal, 16S

Identifiers

PMID37165176
PMCPMC10229427
OpenAlexW4376132993

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.