Evidence map›Paper›PMID 37164543›Full record

ArticleMethods in cell biology2023

Single-molecule imaging in the primary cilium.

Lucien E Weiss, Julia F Love, Joshua Yoon, Colin J Comerci, Ljiljana Milenkovic, Tomoharu Kanie, Peter K Jackson, Tim Stearns, Anna-Karin Gustavsson

Open access · greenAbstract read
In one paragraph

Article in Methods in cell biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
19.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Primary cilia and neural computation.Journal of biomedical science · 2026
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 7 institutions in 2 countries.

Lucien E WeissDepartment of Engineering Physics, Polytechnique Montréal, Montreal, QC, Canada. Electronic address: lucien.weiss@polymtl.ca.
Julia F LoveDepartment of Chemistry, Rice University, Houston, TX, United States.
Joshua YoonExpedia Group, Seattle, WA, United States.
Colin J ComerciDivision of Biological Sciences, University of California San Diego, La Jolla, CA, United States.
Ljiljana MilenkovicDepartment of Biology, Stanford University, Stanford, CA, United States.
Tomoharu KanieDepartment of Cell Biology, University of Oklahoma Health Sciences Center, Oklahoma, OK, United States.
Peter K JacksonBaxter Laboratory, Department of Microbiology & Immunology, Stanford University School of Medicine, Stanford, CA, United States; Department of Pathology, Stanford University School of Medicine, Stanford, CA, United States.
Tim StearnsDepartment of Biology, Stanford University, Stanford, CA, United States; Rockefeller University, New York City, NY, United States.
Anna-Karin GustavssonDepartment of Chemistry, Rice University, Houston, TX, United States; Department of BioSciences, Rice University, Houston, TX, United States; Institute of Biosciences and Bioengineering, Rice University, Houston, TX, United States; Smalley-Curl Institute, Rice University, Houston, TX, United States. Electronic address: anna-karin.gustavsson@rice.edu.
Rice University · USStanford University · USBaxter (United States) · USExpedia Group (United States) · USPolytechnique Montréal · CAUniversity of California, San Diego · USUniversity of Oklahoma Health Sciences Center · US

Funding

Project 3: Defining and targeting mechanisms of E2F transcription factor regulationP01CA254867 · NCI · STANFORD UNIVERSITY · PI Seth Michael Rubin, Jan M Skotheim · 2022 to 2026
$8.9M
Mapping the CPLANE interactome, an extensive protein interaction network underlying human ciliopathiesR01HD085901 · NICHD · UNIVERSITY OF TEXAS AT AUSTIN · PI EDWARD M MARCOTTE, John B Wallingford · 2016 to 2026
$6.2M
Mechanisms of Ciliary Signaling Controlling Obesity and Metabolic DiseaseR01GM121565 · NIGMS · STANFORD UNIVERSITY · PI JACKSON, PETER KENT · 2017 to 2025
$4.3M
Structure and mechanism of the centrosome-cilium complexR35GM130286 · NIGMS · STANFORD UNIVERSITY · PI STEARNS, TIM · 2019 to 2023
$3.4M
Genetic dissection of oncogenic Kras signalingR01CA230025 · NCI · STANFORD UNIVERSITY · PI WINSLOW, MONTE MEIER · 2021 to 2025
$2.2M
Fatty Acid Signaling via GPCRs in Primary Cilia Controls Adipogenesis and Insulin Secretion, Regulating Obesity and DiabetesR01DK127665 · NIDDK · STANFORD UNIVERSITY · PI JACKSON, PETER KENT, KIM, SEUNG K · 2021 to 2024
$2.0M
Centriolar-ciliary signaling mechanisms in tissue regeneration and differentiationR01GM114276 · NIGMS · STANFORD UNIVERSITY · PI JACKSON, PETER KENT · 2015 to 2018
$1.5M
Three-dimensional super-resolution imaging and tracking of disease and treatment mechanisms of progeriaR00GM134187 · NIGMS · RICE UNIVERSITY · PI GUSTAVSSON, ANNA KARIN EVA · 2021 to 2023
$747k
Understudied GPCRs connecting signaling in primary cilia to obesity and metabolic diseaseR03TR004209 · NCATS · STANFORD UNIVERSITY · PI JACKSON, PETER KENT · 2022 to 2022
$160k
NCATS NIH HHS R03 TR004209NCI NIH HHS P01 CA254867NCI NIH HHS R01 CA230025NICHD NIH HHS R01 HD085901NIDDK NIH HHS R01 DK127665NIGMS NIH HHS R00 GM134187NIGMS NIH HHS R01 GM114276NIGMS NIH HHS R01 GM121565NIGMS NIH HHS R35 GM130286
6 · The paper itself

Abstract

The primary cilium is an important signaling organelle critical for normal development and tissue homeostasis. Its small dimensions and complexity necessitate advanced imaging approaches to uncover the molecular mechanisms behind its function. Here, we outline how single-molecule fluorescence microscopy can be used for tracking molecular dynamics and interactions and for super-resolution imaging of nanoscale structures in the primary cilium. Specifically, we describe in detail how to capture and quantify the 2D dynamics of individual transmembrane proteins PTCH1 and SMO and how to map the 3D nanoscale distributions of the inversin compartment proteins INVS, ANKS6, and NPHP3. This protocol can, with minor modifications, be adapted for studies of other proteins and cell lines to further elucidate the structure and function of the primary cilium at the molecular level.

Indexed as

CiliaKidney Diseases, CysticCell LineHumansSignal TransductionSingle Molecule Imaging3D imagingHedgehog signalingInversin compartmentPoint-spread-function engineeringPrimary ciliumSingle-molecule trackingSuper-resolution microscopy

Identifiers

PMID37164543
PMCPMC10509820
OpenAlexW4321796739

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.