Evidence map›Paper›PMID 37161940›Full record

ArticlePlant biotechnology journal2023

A dramatic decline in fruit citrate induced by mutagenesis of a NAC transcription factor, AcNAC1.

Bei-Ling Fu, Wen-Qiu Wang, Xiang Li, Tong-Hui Qi, Qiu-Fang Shen, Kun-Feng Li, Xiao-Fen Liu, Shao-Jia Li, Andrew C Allan, Xue-Ren Yin

Open access · goldAbstract read
In one paragraph

Article in Plant biotechnology journal, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
14.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 36 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 4 countries.

Bei-Ling Fu *Horticulture Department, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, China.ORCID 0000-0001-5487-6479
Wen-Qiu Wang *Horticulture Department, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, China.ORCID 0000-0002-2177-0640
Xiang LiHorticultural Sciences, Genetics Institute, University of Florida, Gainesville, Florida, USA.
Tong-Hui QiHorticulture Department, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, China.
Qiu-Fang ShenDepartment of Agronomy, Key Laboratory of Crop Germplasm Resource of Zhejiang Province, Zhejiang University, Hangzhou, China.ORCID 0000-0002-6589-7379
Kun-Feng LiAgricultural Experiment Station, Zhejiang University, Hangzhou, China.
Xiao-Fen LiuHorticulture Department, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, China.ORCID 0000-0003-1612-0704
Shao-Jia LiHorticulture Department, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, China.ORCID 0000-0001-8702-5590
Andrew C AllanThe New Zealand Institute for Plant & Food Research Limited (Plant & Food Research) Mt Albert, Auckland, New Zealand.ORCID 0000-0003-1944-7067
Xue-Ren YinHorticulture Department, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, China.ORCID 0000-0002-1282-4432
Zhejiang A & F University · CNZhejiang University · CNPlant & Food Research · NZUniversity of Florida · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Citrate is a common primary metabolite which often characterizes fruit flavour. The key regulators of citrate accumulation in fruit and vegetables are poorly understood. We systematically analysed the dynamic profiles of organic acid components during the development of kiwifruit (Actinidia spp.). Citrate continuously accumulated so that it became the predominate contributor to total acidity at harvest. Based on a co-expression network analysis using different kiwifruit cultivars, an Al-ACTIVATED MALATE TRANSPORTER gene (AcALMT1) was identified as a candidate responsible for citrate accumulation. Electrophysiological assays using expression of this gene in Xenopus oocytes revealed that AcALMT1 functions as a citrate transporter. Additionally, transient overexpression of AcALMT1 in kiwifruit significantly increased citrate content, while tissues showing higher AcALMT1 expression accumulated more citrate. The expression of AcALMT1 was highly correlated with 17 transcription factor candidates. However, dual-luciferase and EMSA assays indicated that only the NAC transcription factor, AcNAC1, activated AcALMT1 expression via direct binding to its promoter. Targeted CRISPR-Cas9-induced mutagenesis of AcNAC1 in kiwifruit resulted in dramatic declines in citrate levels while malate and quinate levels were not substantially affected. Our findings show that transcriptional regulation of a major citrate transporter, by a NAC transcription factor, is responsible for citrate accumulation in kiwifruit, which has broad implications for other fruits and vegetables.

Indexed as

Citric AcidTranscription FactorsFruitGene Expression Regulation, PlantMalatesPlant ProteinsCitric AcidMalatesmalic acidPlant ProteinsTranscription FactorsActinidiaAl-activated malate transporters (ALMTs)citratekiwifruitNAC transcriptional factor

Identifiers

PMID37161940
PMCPMC10363754
OpenAlexW4376121820

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.