Evidence map›Paper›PMID 37158533›Full record

ArticleThe Turkish journal of gastroenterology : the official journal of Turkish Society of Gastroenterology2023

Functional Study of SAMD9L in Familial Gastric Cancer.

Xu Kaixuan, Zhang Xiaobin, Tang Jiaxuan, Liu Shihui, Wang Xinxin, Hu Shuwei, Dai Penggao, Luo Xiang

Open access · diamondAbstract read
In one paragraph

Article in The Turkish journal of gastroenterology : the official journal of Turkish Society of Gastroenterology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Xu KaixuanNational Engineering Research Center for Miniaturized Detection Systems, Northwest University College of Life Sciences, Xi'an, China.
Zhang XiaobinThe University Hospital of Northwest University, Xi'an, China.
Tang JiaxuanNational Engineering Research Center for Miniaturized Detection Systems, Northwest University College of Life Sciences, Xi'an, China.
Liu ShihuiNational Engineering Research Center for Miniaturized Detection Systems, Northwest University College of Life Sciences, Xi'an, China.
Wang XinxinNational Engineering Research Center for Miniaturized Detection Systems, Northwest University College of Life Sciences, Xi'an, China.
Hu ShuweiNational Engineering Research Center for Miniaturized Detection Systems, Northwest University College of Life Sciences, Xi'an, China.
Dai PenggaoNational Engineering Research Center for Miniaturized Detection Systems, Northwest University College of Life Sciences, Xi'an, China; Shaanxi Lifegen Co., Ltd, Xi'an, China.
Luo XiangDepartment of Respiratory, Tongchuan People's Hospital, Tongchuan, China.
Northwest University · CNThe People's Hospital Tongling · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundFamilial aggregation occurs in approximately 10% of cases of gastric cancer. The genetic predisposition or cause of the disease in only about 40% of hereditary gastric cancer cases is known, while the genetic factors of the remaining cases remain to be studied.

methodsSamples were collected from a family with gastric cancer, including 3 gastric cancer and 17 healthy samples. Whole-exome sequencing was performed on samples from 3 patients with gastric cancer and 1 sample from healthy peripheral blood. SAMD9L was knocked down using small interfering RNAs and short hairpin RNA. The expression of SAMD9L was detected by quantitative real-time polymerase chain reaction and Western blot in SGC-7901 cells. CCK-8 assay was used to detect the proliferation of gastric cancer cells. The migration and invasion of gastric cancer cells were detected by Transwell assay and scratch assay. The cell apoptosis was detected by flow cytometry.

resultsTwelve single-nucleotide variants and 9 insertions/deletions mutation sites were identified as candidate genes. Among them, SAMD9L regulates cell proliferation as a tumor suppressor gene. The experiments of knocking down SAMD9L in SGC-7901 cells revealed that reduced expression of SAMD9L significantly enhanced the proliferation, migration, and invasion of SGC-7901 cells.

conclusionsThese results suggest that SAMD9L inhibits the proliferation of gastric cancer cells, thereby increasing the risk of gastric cancer in people with SAMD9L downregulation. Therefore, SAMD9L may represent a susceptibility gene of this gastric cancer family.

Indexed as

AdenocarcinomaStomach NeoplasmsApoptosisCell Line, TumorCell ProliferationGene Expression Regulation, NeoplasticHumansNeoplasm InvasivenessRNA, Small InterferingTranscription FactorsTumor Suppressor ProteinsRNA, Small InterferingSAMD9L protein, humanTranscription FactorsTumor Suppressor Proteins

Identifiers

PMID37158533
PMCPMC10334681
OpenAlexW4375955828

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.