Evidence map›Paper›PMID 37156836›Full record

ArticleThe ISME journal2023

Predation of oomycetes by myxobacteria via a specialized CAZyme system arising from adaptive evolution.

Lei Zhang, Chaonan Dong, Jihong Wang, Muxing Liu, Juying Wang, Jiexiong Hu, Lin Liu, Xinyu Liu, Chengyao Xia, Lingli Zhong and 10 more

Open access · bronzeAbstract read
In one paragraph

Article in The ISME journal, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 32 citations in OpenAlex.

  1. Enhanced Endophytic Colonization of Flavobacterium Promotes Plant Resistance to Fusarium Wilt.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
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  5. Role of DKxanthenes inJournal of microbiology and biotechnology · 2026
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  8. Article
  9. Biocontrol of watermelon Fusarium wilt caused byFrontiers in microbiology · 2026
    Article
  10. Review
  11. Review
  12. Article
  13. Review
  14. Article
  15. Frontiers in microbiology · 2025
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 5 institutions in 2 countries.

Lei ZhangKey Laboratory of Agricultural Environmental Microbiology, Ministry of Agriculture and Rural Affairs, College of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, China.
Chaonan DongKey Laboratory of Agricultural Environmental Microbiology, Ministry of Agriculture and Rural Affairs, College of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, China.
Jihong WangKey Laboratory of Agricultural Environmental Microbiology, Ministry of Agriculture and Rural Affairs, College of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, China.
Muxing LiuThe Key Laboratory of Monitoring and Management of Plant Diseases ansingled Insects of Ministry of Agriculture and Rural Affairs, College of Plant Protection, Nanjing Agriculture University, Nanjing, 210095, China.
Juying WangKey Laboratory of Agricultural Environmental Microbiology, Ministry of Agriculture and Rural Affairs, College of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, China.
Jiexiong HuThe Key Laboratory of Monitoring and Management of Plant Diseases ansingled Insects of Ministry of Agriculture and Rural Affairs, College of Plant Protection, Nanjing Agriculture University, Nanjing, 210095, China.
Lin LiuKey Laboratory of Agricultural Environmental Microbiology, Ministry of Agriculture and Rural Affairs, College of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, China.
Xinyu LiuThe Key Laboratory of Monitoring and Management of Plant Diseases ansingled Insects of Ministry of Agriculture and Rural Affairs, College of Plant Protection, Nanjing Agriculture University, Nanjing, 210095, China.
Chengyao XiaKey Laboratory of Agricultural Environmental Microbiology, Ministry of Agriculture and Rural Affairs, College of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, China.
Lingli ZhongKey Laboratory of Agricultural Environmental Microbiology, Ministry of Agriculture and Rural Affairs, College of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, China.
Yuqiang ZhaoInstitute of Botany, Jiangsu Province and Chinese Academy of Sciences, Nanjing, 210014, China.
Xianfeng YeKey Laboratory of Agricultural Environmental Microbiology, Ministry of Agriculture and Rural Affairs, College of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, China.
Yan HuangKey Laboratory of Agricultural Environmental Microbiology, Ministry of Agriculture and Rural Affairs, College of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, China.
Jiaqin FanThe Key Laboratory of Monitoring and Management of Plant Diseases ansingled Insects of Ministry of Agriculture and Rural Affairs, College of Plant Protection, Nanjing Agriculture University, Nanjing, 210095, China.
Hui CaoKey Laboratory of Agricultural Environmental Microbiology, Ministry of Agriculture and Rural Affairs, College of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, China.ORCID 0000-0003-3406-3803
Jingjing WangState Key Laboratory of Microbial Technology, Institute of Microbial Technology, Shandong University, Qingdao, China.
Yuezhong LiState Key Laboratory of Microbial Technology, Institute of Microbial Technology, Shandong University, Qingdao, China.
Daniel WallDepartment of Molecular Biology, University of Wyoming, 1000 E University Avenue, Laramie, WY, 82071, USA.ORCID 0000-0002-0273-1371
Zhoukun LiKey Laboratory of Agricultural Environmental Microbiology, Ministry of Agriculture and Rural Affairs, College of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, China. zkl@njau.edu.cn.ORCID 0000-0003-2328-5232
Zhongli CuiKey Laboratory of Agricultural Environmental Microbiology, Ministry of Agriculture and Rural Affairs, College of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, China. czl@njau.edu.cn.
Nanjing Agricultural University · CNMinistry of Agriculture and Rural Affairs · CNChinese Academy of Sciences · CNShandong University · CNUniversity of Wyoming · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

As social micropredators, myxobacteria are studied for their abilities to prey on bacteria and fungi. However, their predation of oomycetes has received little attention. Here, we show that Archangium sp. AC19 secretes a carbohydrate-active enzyme (CAZyme) cocktail during predation on oomycetes Phytophthora. These enzymes include three specialized β-1,3-glucanases (AcGlu13.1, -13.2 and -13.3) that act as a cooperative consortium to target β-1,3-glucans of Phytophthora. However, the CAZymes showed no hydrolytic effects on fungal cells, even though fungi contain β-1,3-glucans. Heterologous expression of AcGlu13.1, -13.2 or -13.3 enzymes in Myxococcus xanthus DK1622, a model myxobacterium that antagonizes but does not predate on P. sojae, conferred a cooperative and mycophagous ability that stably maintains myxobacteria populations as a mixture of engineered strains. Comparative genomic analyses suggest that these CAZymes arose from adaptive evolution among Cystobacteriaceae myxobacteria for a specific prey killing behavior, whereby the presence of Phytophthora promotes growth of myxobacterial taxa by nutrient release and consumption. Our findings demonstrate that this lethal combination of CAZymes transforms a non-predatory myxobacterium into a predator with the ability to feed on Phytophthora, and provides new insights for understanding predator-prey interactions. In summary, our work extends the repertoire of myxobacteria predatory strategies and their evolution, and suggests that these CAZymes can be engineered as a functional consortium into strains for biocontrol of Phytophothora diseases and hence crop protection.

Indexed as

MyxococcalesMyxococcus xanthusPhytophthoraAnimalsGlucansPredatory BehaviorGlucans

Identifiers

PMID37156836
PMCPMC10284895
OpenAlexW4375864130

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.