ArticleScientific reports2023
Mito-nuclear discordance within Anthozoa, with notes on unique properties of their mitochondrial genomes.
Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.
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25 citing papers in PubMed, 45 citations in OpenAlex.
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- Mitochondrial genomic variation, evolutionary dynamics, and phylogeny of forest-associatedIMA fungus · 2026Article
- Dissecting discordance of mitochondrial and nuclear phylogenetic trees in insects.Crop health · 2025Article
- Diversification of diterpene biosynthesis occurred early in octocoral evolution.Proceedings of the National Academy of Sciences of the United States of America · 2025Article
- Hidden in Plain Sight: Integrative Taxonomy Discovers Two New Species of Digitate Soft Corals in the Urban Waters of China's Greater Bay Area.Ecology and evolution · 2025Article
- The hidden diversity of Saudi Arabian Red Sea octocorals revealed through a morpho-molecular assessment across bathymetric and latitudinal gradients.Scientific reports · 2025Article
- Hybridization as driving force for cryptic species diversity in the Caribbean coral genus Madracis.Scientific reports · 2025Article
- Repeatome diversity in sea anemone genomics (Cnidaria: Actiniaria) based on the Actiniaria-REPlib library.BMC genomics · 2025Article
- Phylogenetic relationships and divergence times of Odonata inferred from mitochondrial genome.iScience · 2025Article
- Resolving Acuticulata (Metridioidea: Enthemonae: Actiniaria), a clade containing many invasive species of sea anemones.PloS one · 2025Article
- First Solenogastres (Mollusca, Aplacophora) from Puerto Rico: descriptions of two new species and notes on their coral hosts.ZooKeys · 2025Article
- Phylogeography of Cold Water Soft CoralEcology and evolution · 2024Article
- Comparative mitogenomics of marine angelfishes (F: Pomacanthidae).Ecology and evolution · 2024Article
- The Mitogenomic Landscape of Hexacorallia Corals: Insight into Their Slow Evolution.International journal of molecular sciences · 2024Article
- Skimming genomes for systematics and DNA barcodes of corals.Ecology and evolution · 2024Article
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Authors and funding
10 authors at 5 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Whole mitochondrial genomes are often used in phylogenetic reconstruction. However, discordant patterns in species relationships between mitochondrial and nuclear phylogenies are commonly observed. Within Anthozoa (Phylum Cnidaria), mitochondrial (mt)-nuclear discordance has not yet been examined using a large and comparable dataset. Here, we used data obtained from target-capture enrichment sequencing to assemble and annotate mt genomes and reconstruct phylogenies for comparisons to phylogenies inferred from hundreds of nuclear loci obtained from the same samples. The datasets comprised 108 hexacorals and 94 octocorals representing all orders and > 50% of extant families. Results indicated rampant discordance between datasets at every taxonomic level. This discordance is not attributable to substitution saturation, but rather likely caused by introgressive hybridization and unique properties of mt genomes, including slow rates of evolution driven by strong purifying selection and substitution rate variation. Strong purifying selection across the mt genomes caution their use in analyses that rely on assumptions of neutrality. Furthermore, unique properties of the mt genomes were noted, including genome rearrangements and the presence of nad5 introns. Specifically, we note the presence of the homing endonuclease in ceriantharians. This large dataset of mitochondrial genomes further demonstrates the utility of off-target reads generated from target-capture data for mt genome assembly and adds to the growing knowledge of anthozoan evolution.
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