Evidence map›Paper›PMID 37156763›Full record

ArticleNature communications2023

Structural mechanisms of TRPM7 activation and inhibition.

Kirill D Nadezhdin, Leonor Correia, Chamali Narangoda, Dhilon S Patel, Arthur Neuberger, Thomas Gudermann, Maria G Kurnikova, Vladimir Chubanov, Alexander I Sobolevsky

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed, 1 pooled it
10.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 1 synthesis or guideline pooled it, 62 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 3 countries.

Kirill D NadezhdinDepartment of Biochemistry and Molecular Biophysics, Columbia University, New York, NY, USA.ORCID 0000-0002-7140-0779
Leonor CorreiaWalther-Straub Institute of Pharmacology and Toxicology, LMU Munich, Munich, Germany.
Chamali NarangodaChemistry Department, Carnegie Mellon University, Pittsburgh, PA, USA.ORCID 0000-0001-6786-3992
Dhilon S PatelChemistry Department, Carnegie Mellon University, Pittsburgh, PA, USA.
Arthur NeubergerDepartment of Biochemistry and Molecular Biophysics, Columbia University, New York, NY, USA.ORCID 0000-0002-7744-6559
Thomas GudermannWalther-Straub Institute of Pharmacology and Toxicology, LMU Munich, Munich, Germany.ORCID 0000-0002-0323-7965
Maria G KurnikovaChemistry Department, Carnegie Mellon University, Pittsburgh, PA, USA. kurnikova@cmu.edu.ORCID 0000-0002-8010-8374
Vladimir ChubanovWalther-Straub Institute of Pharmacology and Toxicology, LMU Munich, Munich, Germany. vladimir.chubanov@lrz.uni-muenchen.de.ORCID 0000-0002-6042-4193
Alexander I SobolevskyDepartment of Biochemistry and Molecular Biophysics, Columbia University, New York, NY, USA. as4005@cumc.columbia.edu.ORCID 0000-0001-5181-8644
Carnegie Mellon University · USColumbia University · USCentre of Experimental Medicine of the Slovak Academy of Sciences · SKColumbia University Irving Medical Center · USGerman Center for Lung Research · DELudwig-Maximilians-Universität München · DE

Funding

WORK ORDER 126643 B539 EXPAND IC SUITE75N91019D00024 · NIAID · LEIDOS BIOMEDICAL RESEARCH, INC. · PI BRISCOE, LYNN · 2019 to 2025
$3932.6M
Structure and Function of AMPA subtype ionotropic glutamate receptorsR01NS083660 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI KURNIKOVA, MARIA G, SOBOLEVSKY, ALEXANDER · 2013 to 2022
$4.3M
Structure and function of Transient Receptor Potential ChannelsR01CA206573 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Alexander Sobolevsky · 2017 to 2026
$3.8M
Single-Particle Cryo-EM Characterization of AMPA Receptor Functional StatesR01NS107253 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Alexander Sobolevsky · 2018 to 2026
$3.5M
Breakthrough Molecular Dynamics Research via an Anton2 SupercomputerR01GM116961 · NIGMS · CARNEGIE-MELLON UNIVERSITY · PI BLOOD, PHILIP D. · 2016 to 2023
$3.0M
Structural and functional principles of activation and regulation of the transient receptor potential channel TRPV3.R01AR078814 · NIAMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Alexander Sobolevsky · 2022 to 2026
$2.8M
Ca2+-Dependent Block by Mematine and Selective Inhibition of Overactive NMDA ReceptorsR01AG065594 · NIA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI JOHNSON, JON W. · 2020 to 2024
$2.8M
Structure and Function of Ionotropic Glutamate ReceptorsR37NS083660 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Alexander Sobolevsky · 2024 to 2026
$1.7M
Channel Block and Gating of NMDA ReceptorsR01GM128195 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI JOHNSON, JON W. · 2019 to 2022
$1.6M
NCI NIH HHS 75N91019D00024NCI NIH HHS R01 CA206573NIAMS NIH HHS R01 AR078814NIA NIH HHS R01 AG065594NIGMS NIH HHS R01 GM116961NIGMS NIH HHS R01 GM128195NINDS NIH HHS R01 NS083660NINDS NIH HHS R01 NS107253NINDS NIH HHS R37 NS083660
6 · The paper itself

Abstract

The transient receptor potential channel TRPM7 is a master regulator of the organismal balance of divalent cations that plays an essential role in embryonic development, immune responses, cell mobility, proliferation, and differentiation. TRPM7 is implicated in neuronal and cardiovascular disorders, tumor progression and has emerged as a new drug target. Here we use cryo-EM, functional analysis, and molecular dynamics simulations to uncover two distinct structural mechanisms of TRPM7 activation by a gain-of-function mutation and by the agonist naltriben, which show different conformational dynamics and domain involvement. We identify a binding site for highly potent and selective inhibitors and show that they act by stabilizing the TRPM7 closed state. The discovered structural mechanisms provide foundations for understanding the molecular basis of TRPM7 channelopathies and drug development.

Indexed as

TRPM Cation ChannelsCell DifferentiationTRPM Cation Channels

Identifiers

PMID37156763
PMCPMC10167348
OpenAlexW4375850285

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.