Evidence map›Paper›PMID 37155231›Full record

ArticleJournal of medical Internet research2023

Predicting Norovirus in England Using Existing and Emerging Syndromic Data: Infodemiology Study.

Nikola Ondrikova, John P Harris, Amy Douglas, Helen E Hughes, Miren Iturriza-Gomara, Roberto Vivancos, Alex J Elliot, Nigel A Cunliffe, Helen E Clough

Open access · goldAbstract read
In one paragraph

Article in Journal of medical Internet research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed, 1 pooled it
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 1 synthesis or guideline pooled it, 11 citations in OpenAlex.

  1. Pooled it
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  4. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Nikola OndrikovaInstitute of Infection, Ecological and Veterinary Sciences, University of Liverpool, Liverpool, United Kingdom.ORCID 0000-0003-4061-2901
John P HarrisField Service, Health Protection Operations, United Kingdom Health Security Agency, Liverpool, United Kingdom.ORCID 0000-0001-9606-9480
Amy DouglasGastrointestinal Infections and Food Safety (One Health) Division, United Kingdom Health Security Agency, London, United Kingdom.ORCID 0000-0001-9270-1549
Helen E HughesNational Institute for Health and Care Research Health Protection Research Unit in Gastrointestinal Infections, University of Liverpool, Liverpool, United Kingdom.ORCID 0000-0002-3664-2983
Miren Iturriza-GomaraCentre for Vaccine Innovation and Access, PATH, Geneva, Switzerland.ORCID 0000-0001-5816-6423
Roberto VivancosNational Institute for Health and Care Research Health Protection Research Unit in Gastrointestinal Infections, University of Liverpool, Liverpool, United Kingdom.ORCID 0000-0002-8203-8867
Alex J ElliotNational Institute for Health and Care Research Health Protection Research Unit in Gastrointestinal Infections, University of Liverpool, Liverpool, United Kingdom.ORCID 0000-0002-6414-3065
Nigel A CunliffeInstitute of Infection, Ecological and Veterinary Sciences, University of Liverpool, Liverpool, United Kingdom.ORCID 0000-0002-5449-4988
Helen E CloughInstitute of Infection, Ecological and Veterinary Sciences, University of Liverpool, Liverpool, United Kingdom.ORCID 0000-0002-8538-0684
University of Liverpool · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundNorovirus is associated with approximately 18% of the global burden of gastroenteritis and affects all age groups. There is currently no licensed vaccine or available antiviral treatment. However, well-designed early warning systems and forecasting can guide nonpharmaceutical approaches to norovirus infection prevention and control.

objectiveThis study evaluates the predictive power of existing syndromic surveillance data and emerging data sources, such as internet searches and Wikipedia page views, to predict norovirus activity across a range of age groups across England.

methodsWe used existing syndromic surveillance and emerging syndromic data to predict laboratory data indicating norovirus activity. Two methods are used to evaluate the predictive potential of syndromic variables. First, the Granger causality framework was used to assess whether individual variables precede changes in norovirus laboratory reports in a given region or an age group. Then, we used random forest modeling to estimate the importance of each variable in the context of others with two methods: (1) change in the mean square error and (2) node purity. Finally, these results were combined into a visualization indicating the most influential predictors for norovirus laboratory reports in a specific age group and region.

resultsOur results suggest that syndromic surveillance data include valuable predictors for norovirus laboratory reports in England. However, Wikipedia page views are less likely to provide prediction improvements on top of Google Trends and Existing Syndromic Data. Predictors displayed varying relevance across age groups and regions. For example, the random forest modeling based on selected existing and emerging syndromic variables explained 60% variance in the ≥65 years age group, 42% in the East of England, but only 13% in the South West region. Emerging data sets highlighted relative search volumes, including "flu symptoms," "norovirus in pregnancy," and norovirus activity in specific years, such as "norovirus 2016." Symptoms of vomiting and gastroenteritis in multiple age groups were identified as important predictors within existing data sources.

conclusionsExisting and emerging data sources can help predict norovirus activity in England in some age groups and geographic regions, particularly, predictors concerning vomiting, gastroenteritis, and norovirus in the vulnerable populations and historical terms such as stomach flu. However, syndromic predictors were less relevant in some age groups and regions likely due to contrasting public health practices between regions and health information-seeking behavior between age groups. Additionally, predictors relevant to one norovirus season may not contribute to other seasons. Data biases, such as low spatial granularity in Google Trends and especially in Wikipedia data, also play a role in the results. Moreover, internet searches can provide insight into mental models, that is, an individual's conceptual understanding of norovirus infection and transmission, which could be used in public health communication strategies.

Indexed as

Caliciviridae InfectionsGastroenteritisNorovirusEnglandHumansInfodemiologybig datacommunicable diseasedisease spreadgastroenteritisgastroenterologistgastroenterologyGoogle TrendsGranger causality frameworkinfection controlinfection preventioninfectious diseaseinfodemiologyinfoveillanceinternal medicineinternet datamental modelmodelnoroviruspredictpredictionsurveillancesyndromic datasyndromic surveillancetransmissiontrendvariable importanceviralviral diseaseviral infectionvirusweb-based dataWikipedia

Identifiers

PMID37155231
PMCPMC10203923
OpenAlexW4375859614

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.