Evidence map›Paper›PMID 37154843›Full record

ArticleThe Journal of cell biology2023

Distinct domains in Ndc1 mediate its interaction with the Nup84 complex and the nuclear membrane.

Ingo Amm, Marion Weberruss, Andrea Hellwig, Johannes Schwarz, Marianna Tatarek-Nossol, Christian Lüchtenborg, Martina Kallas, Britta Brügger, Ed Hurt, Wolfram Antonin

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Structure, function and assembly of nuclear pore complexes.Nature reviews. Molecular cell biology · 2026
    Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Ingo AmmHeidelberg University Biochemistry Center (BZH), University of Heidelberg , Heidelberg, Germany.ORCID 0009-0003-5696-7464
Marion WeberrussInstitute of Biochemistry and Molecular Cell Biology, Medical School, RWTH Aachen University , Aachen, Germany.ORCID 0009-0007-9629-6553
Andrea HellwigDepartment of Neurobiology, Interdisciplinary Center for Neurosciences (IZN), University of Heidelberg, Heidelberg, Germany.ORCID 0000-0002-5971-0862
Johannes SchwarzHeidelberg University Biochemistry Center (BZH), University of Heidelberg , Heidelberg, Germany.ORCID 0000-0003-2946-4987
Marianna Tatarek-NossolInstitute of Biochemistry and Molecular Cell Biology, Medical School, RWTH Aachen University , Aachen, Germany.ORCID 0000-0002-6980-5726
Christian LüchtenborgHeidelberg University Biochemistry Center (BZH), University of Heidelberg , Heidelberg, Germany.ORCID 0000-0002-6770-6046
Martina KallasHeidelberg University Biochemistry Center (BZH), University of Heidelberg , Heidelberg, Germany.ORCID 0009-0005-2761-7275
Britta BrüggerHeidelberg University Biochemistry Center (BZH), University of Heidelberg , Heidelberg, Germany.ORCID 0000-0002-3477-8270
Ed HurtHeidelberg University Biochemistry Center (BZH), University of Heidelberg , Heidelberg, Germany.ORCID 0000-0002-4535-8255
Wolfram AntoninInstitute of Biochemistry and Molecular Cell Biology, Medical School, RWTH Aachen University , Aachen, Germany.ORCID 0000-0003-4669-379X
Heidelberg University · DERWTH Aachen University · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nuclear pore complexes (NPCs) are embedded in the nuclear envelope and built from ∼30 different nucleoporins (Nups) in multiple copies, few are integral membrane proteins. One of these transmembrane nucleoporins, Ndc1, is thought to function in NPC assembly at the fused inner and outer nuclear membranes. Here, we show a direct interaction of Ndc1's transmembrane domain with Nup120 and Nup133, members of the pore membrane coating Y-complex. We identify an amphipathic helix in Ndc1's C-terminal domain binding highly curved liposomes. Upon overexpression, this amphipathic motif is toxic and dramatically alters the intracellular membrane organization in yeast. Ndc1's amphipathic motif functionally interacts with related motifs in the C-terminus of the nucleoporins Nup53 and Nup59, important for pore membrane binding and interconnecting NPC modules. The essential function of Ndc1 can be suppressed by deleting the amphipathic helix from Nup53. Our data indicate that nuclear membrane and presumably NPC biogenesis depends on a balanced ratio between amphipathic motifs in diverse nucleoporins.

Indexed as

Nuclear EnvelopeNuclear Pore Complex ProteinsSaccharomyces cerevisiae ProteinsCell MembraneNuclear PoreSaccharomyces cerevisiaeNDC1 protein, S cerevisiaeNuclear Pore Complex ProteinsNUP133 protein, S cerevisiaeNUP84 protein, S cerevisiaeSaccharomyces cerevisiae Proteins

Identifiers

PMID37154843
PMCPMC10165475
OpenAlexW4375954928

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.