Evidence map›Paper›PMID 37154706›Full record

ArticleMicrobiology spectrum2023

Comparative Genomic Analyses of Lactococcus garvieae Isolated from Bovine Mastitis in China.

Yushan Lin, Jinge Han, Herman W Barkema, Yue Wang, Jian Gao, John P Kastelic, Bo Han, Shunyi Qin, Zhaoju Deng

Open access · goldAbstract read
In one paragraph

Article in Microbiology spectrum, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Antimicrobial Resistance inMicroorganisms · 2024
    Article
  10. Genomic investigation ofMicrobiology spectrum · 2024
    Article
  11. Redefining piscine lactococcosis.Applied and environmental microbiology · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Yushan Lin *Department of Clinical Veterinary Medicine, College of Veterinary Medicine, China Agricultural University, Beijing, People's Republic of China.
Jinge Han *College of Animal Science and Veterinary Medicine, Tianjin Agricultural University, Tianjin, People's Republic of China.
Herman W BarkemaFaculty of Veterinary Medicine, University of Calgary, Calgary, Alberta, Canada.
Yue WangDepartment of Clinical Veterinary Medicine, College of Veterinary Medicine, China Agricultural University, Beijing, People's Republic of China.
Jian GaoDepartment of Clinical Veterinary Medicine, College of Veterinary Medicine, China Agricultural University, Beijing, People's Republic of China.
John P KastelicFaculty of Veterinary Medicine, University of Calgary, Calgary, Alberta, Canada.
Bo HanDepartment of Clinical Veterinary Medicine, College of Veterinary Medicine, China Agricultural University, Beijing, People's Republic of China.ORCID 0000-0002-4798-7725
Shunyi QinCollege of Animal Science and Veterinary Medicine, Tianjin Agricultural University, Tianjin, People's Republic of China.
Zhaoju DengDepartment of Clinical Veterinary Medicine, College of Veterinary Medicine, China Agricultural University, Beijing, People's Republic of China.
China Agricultural University · CNTianjin Agricultural University · CNUniversity of Calgary · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lactococcus garvieae is an emerging zoonotic pathogen, but there are few reports regarding bovine mastitis. The prevalence of L. garvieae represents an increasing disease threat and global public health risk. Thirty-nine L. garvieae isolates were obtained from 2,899 bovine clinical mastitis milk samples in 6 provinces of China from 2017 to 2021. Five clonal complexes were determined from 32 multilocus sequence types (MLSTs) of L. garvieae: sequence type 46 (ST46) was the predominant sequence type, and 13 novel MLSTs were identified. All isolates were resistant to chloramphenicol and clindamycin, but susceptible to penicillin, ampicillin, amoxicillin-clavulanic acid, imipenem, ceftiofur, enrofloxacin, and marbofloxacin. Based on genomic analyses, L. garvieae had 6,310 genes, including 1,015 core, 3,641 accessory, and 1,654 unique genes. All isolates had virulence genes coding for collagenase, fibronectin-binding protein, glyceraldehyde-3-phosphate dehydrogenase, superoxide dismutase, and NADH oxidase. Most isolates had

Indexed as

Anti-Infective AgentsMastitis, BovineAnimalsAnti-Bacterial AgentsCattleChloramphenicolClindamycinFemaleFibronectinsGenomicsHumansLactococcusAnti-Bacterial AgentsAnti-Infective AgentsChloramphenicolClindamycinFibronectinsantimicrobial resistancebovine mastitishost adaptationLactococcus garvieaepopulation structurevirulence genes

Identifiers

PMID37154706
PMCPMC10269658
OpenAlexW4375956218

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.