Evidence map›Paper›PMID 37154465›Full record

ArticlePlant biotechnology journal2023

Comparative transcriptome profiling reveals the multiple levels of crosstalk in phytohormone networks in Brassica napus.

Dongxu Liu, Guanbo Yan, Shengbo Wang, Liangqian Yu, Wei Lin, Shaoping Lu, Liang Guo, Qing-Yong Yang, Cheng Dai

Open access · goldAbstract read
In one paragraph

Article in Plant biotechnology journal, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
9.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Pan-genome analysis of the R2R3-MYB genes family inFrontiers in plant science · 2025
    Article
  13. Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Dongxu Liu *National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China.ORCID 0000-0003-4732-3950
Guanbo Yan *National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China.
Shengbo WangNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China.
Liangqian YuNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China.
Wei LinNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China.
Shaoping LuNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China.ORCID 0000-0001-9327-6193
Liang GuoNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China.ORCID 0000-0001-7191-5062
Qing-Yong YangNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China.ORCID 0000-0002-3510-8906
Cheng DaiNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China.ORCID 0000-0002-4853-8278
Huazhong Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plant hormones are the intrinsic factors that control plant development. The integration of different phytohormone pathways in a complex network of synergistic, antagonistic and additive interactions has been elucidated in model plants. However, the systemic level of transcriptional responses to hormone crosstalk in Brassica napus is largely unknown. Here, we present an in-depth temporal-resolution study of the transcriptomes of the seven hormones in B. napus seedlings. Differentially expressed gene analysis revealed few common target genes that co-regulated (up- and down-regulated) by seven hormones; instead, different hormones appear to regulate distinct members of protein families. We then constructed the regulatory networks between the seven hormones side by side, which allowed us to identify key genes and transcription factors that regulate the hormone crosstalk in B. napus. Using this dataset, we uncovered a novel crosstalk between gibberellin and cytokinin in which cytokinin homeostasis was mediated by RGA-related CKXs expression. Moreover, the modulation of gibberellin metabolism by the identified key transcription factors was confirmed in B. napus. Furthermore, all data were available online from http://yanglab.hzau.edu.cn/BnTIR/hormone. Our study reveals an integrated hormone crosstalk network in Brassica napus, which also provides a versatile resource for future hormone studies in plant species.

Indexed as

Brassica napusPlant Growth RegulatorsCytokininsGene Expression ProfilingGibberellinsHormonesTranscription FactorsCytokininsGibberellinsHormonesPlant Growth RegulatorsTranscription FactorsBrassica napusco-expressioncross-regulationphytohormonestranscriptomes

Identifiers

PMID37154465
PMCPMC10363766
OpenAlexW4375955757

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.