Evidence map›Paper›PMID 37150408›Full record

ArticleAntiviral research2023

Development of a CRISPR-Cas12a rapid diagnostic for human cytomegalovirus.

Chandler H Monk, Brady M Youngquist, Alyson D Brady, Jeffrey G Shaffer, Tony Y Hu, Bo Ning, Kevin J Zwezdaryk

Open access · hybridAbstract read
In one paragraph

Article in Antiviral research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Chandler H MonkBioinnovation Program, Tulane University School of Medicine, New Orleans, LA, 70112, USA; Department of Microbiology and Immunology, Tulane University School of Medicine, New Orleans, LA, 70112, USA.
Brady M YoungquistCenter for Cellular and Molecular Diagnostics, Tulane University School of Medicine, New Orleans, LA, 70112, USA; Department of Biochemistry and Molecular Biology, Tulane University School of Medicine, New Orleans, LA, 70112, USA.
Alyson D BradyNeurosceince Program, Tulane University, New Orleans, LA, 70112, United States.
Jeffrey G ShafferDepartment of Biostatistics and Data Science, Tulane School of Public Health and Tropical Medicine, New Orleans, LA, 70112, USA.
Tony Y HuCenter for Cellular and Molecular Diagnostics, Tulane University School of Medicine, New Orleans, LA, 70112, USA; Department of Biochemistry and Molecular Biology, Tulane University School of Medicine, New Orleans, LA, 70112, USA.
Bo NingCenter for Cellular and Molecular Diagnostics, Tulane University School of Medicine, New Orleans, LA, 70112, USA; Department of Biochemistry and Molecular Biology, Tulane University School of Medicine, New Orleans, LA, 70112, USA.
Kevin J ZwezdarykDepartment of Microbiology and Immunology, Tulane University School of Medicine, New Orleans, LA, 70112, USA; Tulane Brain Institute, Tulane University School of Medicine, New Orleans, LA, 70112, USA; Tulane Center for Aging, Tulane University School of Medicine, New Orleans, LA, 70112, USA. Electronic address: kzwezdar@tulane.edu.
Tulane University · US

Funding

Tracking & Evaluation CoreU54GM104940 · NIGMS · LSU PENNINGTON BIOMEDICAL RESEARCH CTR · PI Peter Todd Katzmarzyk · 2012 to 2026
$69.1M
The role of the CMV-associated reactive oxygen species in age-relatedP20GM103629 · NIGMS · TULANE UNIVERSITY OF LOUISIANA · PI TIAN, AIGUO · 2012 to 2021
$22.4M
Tulane University COVID Antibody and Immunity Network (TUCAIN) SupplementU54CA260581 · NCI · TULANE UNIVERSITY OF LOUISIANA · PI ROBINSON, JAMES E · 2020 to 2024
$9.2M
CMV infection impact on placental immunometabolism and fetal immunityR01HD107790 · NICHD · TULANE UNIVERSITY OF LOUISIANA · PI KAUR, AMITINDER · 2022 to 2024
$1.3M
Interdisciplinary Predoctoral Training in BioinnovationT32EB027632 · NIBIB · TULANE UNIVERSITY OF LOUISIANA · PI GAVER, DONALD P. · 2019 to 2023
$813k
Liposome fusion enabled extracellular vesicle detection for COVID-19R21AI169582 · NIAID · TULANE UNIVERSITY OF LOUISIANA · PI NING, BO · 2022 to 2023
$419k
NCI NIH HHS U54 CA260581NIAID NIH HHS R21 AI169582NIBIB NIH HHS T32 EB027632NICHD NIH HHS R01 HD107790NIGMS NIH HHS P20 GM103629NIGMS NIH HHS U54 GM104940
6 · The paper itself

Abstract

Despite decades of research, human cytomegalovirus (CMV) continues to contribute to significant morbidity and mortality in transplant settings and remains the leading cause of viral congenital infections. Clinical diagnosis of CMV infection and/or reactivation under these settings is completed using real time quantitative polymerase chain reaction (RT-qPCR). This assay performs well but is hampered by poor sensitivity and a lack of standardization among testing facilities. A point-of-care rapid diagnostic to determine CMV viremia could address these issues and improve patient care. In this manuscript, we introduce clustered regularly interspaced short palindromic repeats (CRISPR)-Cas12a technology to design and validate a rapid diagnostic for CMV. This system was tested using CMV spiked human saliva and urine samples. Sensitivity of the assay was ∼10 infectious units (IU)/mL. Specificity of the assay was robust and failed to detect other herpesviruses. Collectively, we have designed and validated a rapid diagnostic for CMV that overcomes limitations of the current standard diagnostic. This assay has the potential to be used as a point-of-care screening tool in transplant and neonatal settings.

Indexed as

CytomegalovirusCytomegalovirus InfectionsCRISPR-Cas SystemsDNA, ViralHumansInfant, NewbornRapid Diagnostic TestsReal-Time Polymerase Chain ReactionDNA, ViralCMVCongenital CMVCRISPR-Cas12aCytomegalovirusgRNARapid diagnosticVirus

Identifiers

PMID37150408
PMCPMC10280810
OpenAlexW4372207310

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.