Evidence map›Paper›PMID 37149224›Full record

ArticleVirus research2023

Dynamin-related protein 2 interacts with the membrane-associated methyltransferase domain of plantago asiatica mosaic virus replicase and promotes viral replication.

Haruka Shinji, Nobumitsu Sasaki, Islam Hamim, Yoshiyuki Itoh, Kazuo Taku, Yuho Hayashi, Nami Minato, Hiromitsu Moriyama, Tsutomu Arie, Ken Komatsu

Open access · goldAbstract read
In one paragraph

Article in Virus research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.6field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Haruka ShinjiGraduate School for Agriculture, Tokyo University of Agriculture and Technology (TUAT), Tokyo 183-8509, Japan.
Nobumitsu SasakiGraduate School for Agriculture, Tokyo University of Agriculture and Technology (TUAT), Tokyo 183-8509, Japan.
Islam HamimVirology, Translational Plant Pathology and Agrosecurity Laboratory, Department of Plant Pathology, Bangladesh Agricultural University, Mymensingh-2202, Bangladesh; International Research Fellow, Japan Society for the Promotion of Science, Tokyo 102-0083, Japan.
Yoshiyuki ItohSmart-Core-Facility Promotion Organization, Tokyo University of Agriculture and Technology (TUAT), Tokyo 183-8509, Japan.
Kazuo TakuGraduate School for Agriculture, Tokyo University of Agriculture and Technology (TUAT), Tokyo 183-8509, Japan.
Yuho HayashiGraduate School for Agriculture, Tokyo University of Agriculture and Technology (TUAT), Tokyo 183-8509, Japan.
Nami MinatoInstitute of Science and Technology, Niigata University, Niigata 950-2181 Japan.
Hiromitsu MoriyamaGraduate School for Agriculture, Tokyo University of Agriculture and Technology (TUAT), Tokyo 183-8509, Japan.
Tsutomu ArieGraduate School for Agriculture, Tokyo University of Agriculture and Technology (TUAT), Tokyo 183-8509, Japan.
Ken KomatsuGraduate School for Agriculture, Tokyo University of Agriculture and Technology (TUAT), Tokyo 183-8509, Japan. Electronic address: akomatsu@cc.tuat.ac.jp.
Tokyo University of Agriculture and Technology · JPBangladesh Agricultural University · BDNiigata Institute of Technology · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Positive-strand RNA viruses replicate their RNA in the viral replication complex, a spherical structure formed by remodeling of host intracellular membranes. This process also requires the interaction between viral membrane-associated replication proteins and host factors. We previously identified the membrane-associated determinant of the replicase of plantago asiatica mosaic virus (PlAMV), a positive-strand RNA virus of the genus Potexvirus, in its methyltransferase (MET) domain, and suggested that its interaction with host factors is required to establish viral replication. Here we identified Nicotiana benthamiana dynamin-related protein 2 (NbDRP2) as an interactor of the MET domain of the PlAMV replicase by co-immunoprecipitation (Co-IP) and mass spectrometry analysis. NbDRP2 is closely related to the DRP2 subfamily proteins in Arabidopsis thaliana, AtDRP2A and AtDRP2B. Confocal microscopy observation and Co-IP confirmed the interaction between the MET domain and NbDRP2. Also, the expression of NbDRP2 was induced by PlAMV infection. PlAMV accumulation was reduced when the expression of NbDRP2 gene was suppressed by virus-induced gene silencing. In addition, PlAMV accumulation was reduced in protoplasts treated with dynamin inhibitor. These results indicate a proviral role of the interaction of NbDRP2 with the MET domain in PlAMV replication.

Indexed as

ArabidopsisPotexvirusDynaminsMethyltransferasesNicotianaNucleotidyltransferasesVirus ReplicationDynaminsMethyltransferasesNucleotidyltransferasesArabidopsis thalianaIP-MS analysisMethyltransferase domainNicotiana benthamianaPlantago asiatica mosaic virusViral replication complex

Identifiers

PMID37149224
PMCPMC10345747
OpenAlexW4375856261

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.