Evidence map›Paper›PMID 37149125›Full record

ArticleMathematical biosciences2023

Topological data analysis of antibody dynamics of severe and non-severe patients with COVID-19.

Rodolfo Blanco-Rodríguez, Fernanda Ordoñez-Jiménez, Alexis Erich S Almocera, Gustavo Chinney-Herrera, Esteban Hernandez-Vargas

Abstract read
In one paragraph

Article in Mathematical biosciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Rodolfo Blanco-RodríguezDepartment of Mathematics and Statistical Science, University of Idaho, Moscow, ID, 83844-1103, USA; Institute for Modeling Collaboration and Innovation, University of Idaho, Moscow, ID, USA; Instituto de Matemáticas, Universidad Nacional Autónoma de México, Boulevard Juriquilla 3001, Querétaro, Qro., 76230, Mexico.
Fernanda Ordoñez-JiménezInstituto de Matemáticas, Universidad Nacional Autónoma de México, Boulevard Juriquilla 3001, Querétaro, Qro., 76230, Mexico.
Alexis Erich S AlmoceraDepartment of Mathematics, Physics and Computer Science, College of Science and Mathematics, University of the Philippines Mindanao, Davao City, Philippines.
Gustavo Chinney-HerreraInstituto de Matemáticas, Universidad Nacional Autónoma de México, Boulevard Juriquilla 3001, Querétaro, Qro., 76230, Mexico.
Esteban Hernandez-VargasDepartment of Mathematics and Statistical Science, University of Idaho, Moscow, ID, 83844-1103, USA; Institute for Modeling Collaboration and Innovation, University of Idaho, Moscow, ID, USA; Instituto de Matemáticas, Universidad Nacional Autónoma de México, Boulevard Juriquilla 3001, Querétaro, Qro., 76230, Mexico. Electronic address: esteban@uidaho.edu.

Funding

Sequence-structure-function relationships in human visual photopigmentsP20GM104420 · NIGMS · UNIVERSITY OF IDAHO · PI MILLER, CRAIG R · 2015 to 2024
$22.9M
NIGMS NIH HHS P20 GM104420
6 · The paper itself

Abstract

The COVID-19 pandemic is a significant public health threat with unanswered questions regarding the immune system's role in the disease's severity level. Here, based on antibody kinetic data of severe and non-severe COVID-19 patients, topological data analysis (TDA) highlights that severity is not binary. However, there are differences in the shape of antibody responses that further classify COVID-19 patients into non-severe, severe, and intermediate cases of severity. Based on the results of TDA, different mathematical models were developed to represent the dynamics between the different severity groups. The best model was the one with the lowest average value of the Akaike Information Criterion for all groups of patients. Our results suggest that different immune mechanisms drive differences between the severity groups. Further inclusion of different components of the immune system will be central for a holistic way of tackling COVID-19.

Indexed as

COVID-19COVID-19 TestingHumansPandemicsSARS-CoV-2COVID-19Immune responsesMathematical modelingSARS-CoV-2Topological data analysis

Identifiers

PMID37149125
PMCPMC10159681

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.