Evidence map›Paper›PMID 37148881›Full record

ArticleDevelopmental cell2023

Immune mechanisms shape the clonal landscape during early progression of prostate cancer.

Lara F Tshering, Fu Luo, Savanah Russ, Mariola Szenk, Diana Rubel, Karis Tutuska, James G Rail, Gábor Balázsi, Michael M Shen, Flaminia Talos

Abstract read
In one paragraph

Article in Developmental cell, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Lara F TsheringDepartment of Urology, Stony Brook University, Stony Brook, NY 11794, USA; Department of Pathology, Stony Brook University, Stony Brook, NY 11794, USA.
Fu LuoDepartment of Urology, Stony Brook University, Stony Brook, NY 11794, USA; Department of Pathology, Stony Brook University, Stony Brook, NY 11794, USA.
Savanah RussDepartment of Urology, Stony Brook University, Stony Brook, NY 11794, USA; Department of Pathology, Stony Brook University, Stony Brook, NY 11794, USA.
Mariola SzenkDepartment of Biomedical Engineering, Stony Brook University, Stony Brook, NY 11794, USA; Laufer Center for Physical and Quantitative Biology, Stony Brook University, Stony Brook, NY 11794, USA.
Diana RubelDepartment of Urology, Stony Brook University, Stony Brook, NY 11794, USA; Department of Pathology, Stony Brook University, Stony Brook, NY 11794, USA.
Karis TutuskaDepartment of Urology, Stony Brook University, Stony Brook, NY 11794, USA; Department of Pathology, Stony Brook University, Stony Brook, NY 11794, USA.
James G RailDepartment of Urology, Stony Brook University, Stony Brook, NY 11794, USA; Department of Pathology, Stony Brook University, Stony Brook, NY 11794, USA.
Gábor BalázsiDepartment of Biomedical Engineering, Stony Brook University, Stony Brook, NY 11794, USA; Laufer Center for Physical and Quantitative Biology, Stony Brook University, Stony Brook, NY 11794, USA.
Michael M ShenDepartments of Medicine, Genetics & Development, Urology, and Systems Biology, Herbert Irving Comprehensive Cancer Center, Columbia University Irving Medical Center, New York, NY 10032, USA. Electronic address: mshen@columbia.edu.
Flaminia TalosDepartment of Urology, Stony Brook University, Stony Brook, NY 11794, USA; Department of Pathology, Stony Brook University, Stony Brook, NY 11794, USA; Departments of Medicine, Genetics & Development, Urology, and Systems Biology, Herbert Irving Comprehensive Cancer Center, Columbia University Irving Medical Center, New York, NY 10032, USA; Stony Brook Cancer Center, Stony Brook University, Stony Brook, NY 11794, USA. Electronic address: flaminia.talos@stonybrookmedicine.edu.

Funding

Project 3: Analysis of intrinsic and extrinsic factors that promote prostate neuroendocrine differentiationP01CA265768 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Massimo Loda · 2022 to 2026
$13.4M
Dynamics and evolution of synthetic and natural gene regulatory networksR35GM122561 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI BALAZSI, GABOR · 2017 to 2025
$4.2M
A transdisciplinary approach for dissecting stem cell states in prostate cancerU01CA261822 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI RABADAN, RAUL, SHEN, MICHAEL M. · 2021 to 2025
$3.1M
Analysis of epithelial heterogeneity in prostate development and cancerR01CA238005 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI SHEN, MICHAEL M. · 2019 to 2023
$2.1M
Clonal analysis of epithelial stem cells in prostate regeneration and cancerK22CA188169 · NCI · STATE UNIVERSITY NEW YORK STONY BROOK · PI TALOS, FLAMINIA · 2015 to 2017
$659k
Mechanisms of immune control of intratumor heterogeneity and clonal competitionR21CA270610 · NCI · STATE UNIVERSITY NEW YORK STONY BROOK · PI TALOS, FLAMINIA · 2022 to 2023
$394k
Clonal dynamics and single cell transcriptomics of prostate luminal epithelial cells in homeostasis and agingF99DK131481 · NIDDK · STATE UNIVERSITY NEW YORK STONY BROOK · PI LUO, FU · 2021 to 2021
$33k
NCI NIH HHS K22 CA188169NCI NIH HHS P01 CA265768NCI NIH HHS R01 CA238005NCI NIH HHS R21 CA270610NCI NIH HHS U01 CA261822NIDDK NIH HHS F99 DK131481NIGMS NIH HHS R35 GM122561
6 · The paper itself

Abstract

Understanding the role of the immune microenvironment in modulating intratumor heterogeneity is essential for effective cancer therapies. Using multicolor lineage tracing in genetically engineered mouse models and single-cell transcriptomics, we show that slowly progressing tumors contain a multiclonal landscape of relatively homogeneous subpopulations within a well-organized tumor microenvironment. In more advanced and aggressive tumors, however, the multiclonal landscape develops into competing dominant and minor clones accompanied by a disordered microenvironment. We demonstrate that this dominant/minor landscape is associated with differential immunoediting, in which minor clones are marked by an increased expression of IFNγ-response genes and the T cell-activating chemokines Cxcl9 and Cxcl11. Furthermore, immunomodulation of the IFNγ pathway can rescue minor clones from elimination. Notably, the immune-specific gene signature of minor clones exhibits a prognostic value for biochemical recurrence-free survival in human prostate cancer. These findings suggest new immunotherapy approaches for modulating clonal fitness and tumor progression in prostate cancer.

Indexed as

Prostatic NeoplasmsAnimalsChemokinesClone CellsHumansInterferon-gammaMaleMiceTumor MicroenvironmentChemokinesInterferon-gammaclonal competitionimmunoeditingprostate cancersingle-cell transcriptomics

Identifiers

PMID37148881
PMCPMC10330387

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.