Evidence map›Paper›PMID 37147622›Full record

ArticleBMC genomics2023

Gene expression of male pathway genes sox9 and amh during early sex differentiation in a reptile departs from the classical amniote model.

Susan Wagner, Sarah L Whiteley, Meghan Castelli, Hardip R Patel, Ira W Deveson, James Blackburn, Clare E Holleley, Jennifer A Marshall Graves, Arthur Georges

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
5.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 17 citations in OpenAlex.

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  7. Gonadal Development and Differentiation of Hybrid FInternational journal of molecular sciences · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 1 country.

Susan WagnerInstitute for Applied Ecology, University of Canberra, Bruce, ACT, Australia.
Sarah L WhiteleyInstitute for Applied Ecology, University of Canberra, Bruce, ACT, Australia.
Meghan CastelliInstitute for Applied Ecology, University of Canberra, Bruce, ACT, Australia.
Hardip R PatelGenome Sciences Department. John Curtin School of Medical Research, Australian National University, Canberra, ACT, Australia.
Ira W DevesonKinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research, Darlinghurst, NSW, Australia.
James BlackburnKinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research, Darlinghurst, NSW, Australia.
Clare E HolleleyInstitute for Applied Ecology, University of Canberra, Bruce, ACT, Australia.
Jennifer A Marshall GravesInstitute for Applied Ecology, University of Canberra, Bruce, ACT, Australia.
Arthur GeorgesInstitute for Applied Ecology, University of Canberra, Bruce, ACT, Australia. georges@aerg.canberra.edu.au.
University of Canberra · AUSt Vincent's Clinic · AUAustralian National University · AUAustralian National Wildlife Collection · AUCommonwealth Scientific and Industrial Research Organisation · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSex determination is the process whereby the bipotential embryonic gonads become committed to differentiate into testes or ovaries. In genetic sex determination (GSD), the sex determining trigger is encoded by a gene on the sex chromosomes, which activates a network of downstream genes; in mammals these include SOX9, AMH and DMRT1 in the male pathway, and FOXL2 in the female pathway. Although mammalian and avian GSD systems have been well studied, few data are available for reptilian GSD systems.

resultsWe conducted an unbiased transcriptome-wide analysis of gonad development throughout differentiation in central bearded dragon (Pogona vitticeps) embryos with GSD. We found that sex differentiation of transcriptomic profiles occurs at a very early stage, before the gonad consolidates as a body distinct from the gonad-kidney complex. The male pathway genes dmrt1 and amh and the female pathway gene foxl2 play a key role in early sex differentiation in P. vitticeps, but the central player of the mammalian male trajectory, sox9, is not differentially expressed in P. vitticeps at the bipotential stage. The most striking difference from GSD systems of other amniotes is the high expression of the male pathway genes amh and sox9 in female gonads during development. We propose that a default male trajectory progresses if not repressed by a W-linked dominant gene that tips the balance of gene expression towards the female trajectory. Further, weighted gene expression correlation network analysis revealed novel candidates for male and female sex differentiation.

conclusionOur data reveal that interpretation of putative mechanisms of GSD in reptiles cannot solely depend on lessons drawn from mammals.

Indexed as

ReptilesSex Determination ProcessesSex DifferentiationAnimalsFemaleGene ExpressionGene Expression Regulation, DevelopmentalGonadsMaleSOX9 Transcription FactorSOX9 Transcription FactorAMHGonad differentiationReptilesSex determinationSOX9

Identifiers

PMID37147622
PMCPMC10163765
OpenAlexW4372294558

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.