Evidence map›Paper›PMID 37147453›Full record

ArticleScientific reports2023

Succinylation-associated lncRNA signature to predict the prognosis of colon cancer based on integrative bioinformatics analysis.

Si-Ming Zhang, Cheng Shen, Jue Gu, Jing Li, Xiaohui Jiang, Zhijun Wu, Aiguo Shen

Abstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Si-Ming Zhang *Cancer Research Center, Affiliated Tumor Hospital of Nantong University, Nantong, Jiangsu Province, China.
Cheng Shen *Department of Computer Science and Engineering, Tandon School of Engineering, New York University, Brooklyn, USA.
Jue Gu *Affiliated Hospital of Nantong University, Nantong, China.
Jing LiCancer Research Center, Affiliated Tumor Hospital of Nantong University, Nantong, Jiangsu Province, China.
Xiaohui JiangDepartment of General Surgery, Affiliated Tumor Hospital of Nantong University, Nantong, China.
Zhijun WuDepartment of Oncology, Nantong Second People's Hospital, Nantong, China.
Aiguo ShenCancer Research Center, Affiliated Tumor Hospital of Nantong University, Nantong, Jiangsu Province, China. aiguoshen_nt@126.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Colon cancer (CC) has a poor 5-year survival rate though the treatment techniques and strategies have been improved. Succinylation and long noncoding RNAs (lncRNAs) have prognostic value for CC patients. We analyzed and obtained succinylation-related lncRNA by co-expression in CC. A novel succinylation-related lncRNA model was developed by univariate and Least absolute shrinkage and selection operator (Lasso) regression analysis and we used principal component analysis (PCA), functional enrichment annotation, tumor immune environment, drug sensitivity and nomogram to verify the model, respectively. Six succinylation-related lncRNAs in our model were finally confirmed to distinguish the survival status of CC and showed statistically significant differences in training set, testing set, and entire set. The prognosis of with this model was associated with age, gender, M0 stage, N2 stage, T3 + T4 stage and Stage III + IV. The high-risk group showed a higher mutation rate than the low-risk group. We constructed a model to predict overall survival for 1-, 3-, and 5-year with AUCs of 0.694, 0.729, and 0.802, respectively. The high-risk group was sensitive to Cisplatin and Temozolomide compounds. Our study provided novel insights into the value of the succinylation-related lncRNA signature as a predictor of prognosis, which had high clinical application value in the future.

Indexed as

Colonic NeoplasmsRNA, Long NoncodingComputational BiologyHumansNomogramsPrognosisRNA, Long Noncoding

Identifiers

PMID37147453
PMCPMC10163232

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.