Evidence map›Paper›PMID 37146978›Full record

ArticleJournal of proteome research2023

Deep Proteogenomics of a Photosynthetic Cyanobacterium.

Philipp Spät, Vanessa Krauspe, Wolfgang R Hess, Boris Maček, Nicolas Nalpas

Open access · greenAbstract read
In one paragraph

Article in Journal of proteome research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Philipp SpätQuantitative Proteomics, Interfaculty Institute of Cell Biology, University of Tuebingen, Auf der Morgenstelle 15, 72076 Tübingen, Germany.ORCID 0000-0001-6349-099X
Vanessa KrauspeGenetics & Experimental Bioinformatics, Institute of Biology III, University of Freiburg, Schänzlestraße 1, 79104 Freiburg im Breisgau, Germany.
Wolfgang R HessGenetics & Experimental Bioinformatics, Institute of Biology III, University of Freiburg, Schänzlestraße 1, 79104 Freiburg im Breisgau, Germany.
Boris MačekQuantitative Proteomics, Interfaculty Institute of Cell Biology, University of Tuebingen, Auf der Morgenstelle 15, 72076 Tübingen, Germany.
Nicolas NalpasQuantitative Proteomics, Interfaculty Institute of Cell Biology, University of Tuebingen, Auf der Morgenstelle 15, 72076 Tübingen, Germany.ORCID 0000-0002-7255-6214
University of Tübingen · DEUniversity of Freiburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cyanobacteria, the evolutionary ancestors of plant chloroplasts, contribute substantially to the Earth's biogeochemical cycles and are of great interest for a sustainable economy. Knowledge of protein expression is the key to understanding cyanobacterial metabolism; however, proteome studies in cyanobacteria are limited and cover only a fraction of the theoretical proteome. Here, we performed a comprehensive proteogenomic analysis of the model cyanobacterium

Indexed as

ProteogenomicsSynechocystisBacterial ProteinsChloroplastsPhotosynthesisProteomeBacterial ProteinsProteomecyanobacteriaphotosynthesisprimary metabolismprotein phosphorylationproteogenomicssmall proteinsstress acclimationSynechocystis sp. PCC 6803

Identifiers

PMID37146978
PMCPMC10243305
OpenAlexW4372204608

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.