Evidence map›Paper›PMID 37142987›Full record

ArticleBMC plant biology2023

Transcriptomic profiling of near-isogenic lines reveals candidate genes for a significant locus conferring metribuzin resistance in wheat.

Rudra Bhattarai, Hui Liu, Kadambot H M Siddique, Guijun Yan

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in BMC plant biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.8field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Rudra BhattaraiUWA School of Agriculture and Environment, The University of Western Australia, 6009, Perth, WA, Australia.
Hui LiuUWA School of Agriculture and Environment, The University of Western Australia, 6009, Perth, WA, Australia. hui.liu@uwa.edu.au.
Kadambot H M SiddiqueUWA School of Agriculture and Environment, The University of Western Australia, 6009, Perth, WA, Australia.
Guijun YanUWA School of Agriculture and Environment, The University of Western Australia, 6009, Perth, WA, Australia.
University of Western Australia · AU

Funding

Department of Industry, Science, Energy and Resources, Australian Government GIL53853
6 · The paper itself

Abstract

backgroundWeeds reduce wheat yields in dryland farming systems. Herbicides such as metribuzin are commonly used to control weeds. However, wheat has a narrow safety margin against metribuzin. Standing crops such as wheat with weeds in the same field can also be killed by the same dose of metribuzin. Therefore, it is important to identify metribuzin resistance genes and understand the resistance mechanism in wheat for sustainable crop production. A previous study identified a significant metribuzin resistance wheat QTL, Qsns.uwa.4 A.2, explaining 69% of the phenotypic variance for metribuzin resistance.

resultsTwo NIL pairs with the most contrasting performance in the metribuzin treatment and different in genetic backgrounds were compared using RNA sequence analysis, identifying nine candidate genes underlying Qsns.uwa.4 A.2 responsible for metribuzin resistance. Quantitative RT-qPCR further validated the candidate genes, with TraesCS4A03G1099000 (nitrate excretion transporter), TraesCS4A03G1181300 (aspartyl protease), and TraesCS4A03G0741300 (glycine-rich proteins) identified as key factors for metribuzin resistance.

conclusionIdentified markers and key candidate genes can be used for selecting metribuzin resistance in wheat.

Indexed as

TranscriptomeTriticumGene Expression ProfilingTriazinesmetribuzinTriazinesDifferential gene expressionMarker-assisted selectionMetribuzin resistanceNear-isogenic linesWheat

Identifiers

PMID37142987
PMCPMC10161546
OpenAlexW4372335161

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.