Evidence map›Paper›PMID 37142767›Full record

ArticleNature methods2023

Glutamate indicators with improved activation kinetics and localization for imaging synaptic transmission.

Abhi Aggarwal, Rui Liu, Yang Chen, Amelia J Ralowicz, Samuel J Bergerson, Filip Tomaska, Boaz Mohar, Timothy L Hanson, Jeremy P Hasseman, Daniel Reep and 16 more

Open access · hybridAbstract read
In one paragraph

Article in Nature methods, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 108 papers.

0numbers the graph read from it
0cells of the map it votes in
108citing papers in PubMed
22.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

108 citing papers in PubMed, 163 citations in OpenAlex.

  1. Targeted Mechanogenetics to Modulate Specific Deep Neural Circuits.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
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  2. Tuft Dendrite Spikes Are Accompanied by Selective Input From Distinct Functional Networks.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2026
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  15. What can a neuron compute.bioRxiv : the preprint server for biology · 2026
    Article
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48 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors at 5 institutions in 4 countries.

Abhi AggarwalJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.
Rui LiuDepartment of Physics, University of California, San Diego, La Jolla, CA, USA.
Yang ChenInstitute of Neuroscience and Cluster for Systems Neurology (SyNergy), Technical University of Munich (TUM), Munich, Germany.
Amelia J RalowiczDepartment of Biological Sciences, Dartmouth College, Hanover, NH, USA.ORCID 0000-0002-5431-0309
Samuel J BergersonDepartment of Biological Sciences, Dartmouth College, Hanover, NH, USA.
Filip TomaskaJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.
Boaz MoharJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.
Timothy L HansonJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.
Jeremy P HassemanJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.ORCID 0000-0002-0096-7321
Daniel ReepJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.
Getahun TsegayeJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.
Pantong YaoNeurosciences Graduate Program, University of California San Diego, La Jolla, CA, USA.
Xiang JiDepartment of Physics, University of California, San Diego, La Jolla, CA, USA.
Marinus KloosInstitute of Neuroscience and Cluster for Systems Neurology (SyNergy), Technical University of Munich (TUM), Munich, Germany.
Deepika WalpitaJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.
Ronak PatelJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.
Manuel A MohrJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.ORCID 0000-0002-5189-541X
Paul W TillbergJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.
GENIE Project Team
Loren L LoogerJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.ORCID 0000-0002-7531-1757
Jonathan S MarvinJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.ORCID 0000-0003-2294-4515
Michael B HoppaDepartment of Biological Sciences, Dartmouth College, Hanover, NH, USA.
Arthur KonnerthInstitute of Neuroscience and Cluster for Systems Neurology (SyNergy), Technical University of Munich (TUM), Munich, Germany.ORCID 0000-0002-9548-2676
David KleinfeldDepartment of Physics, University of California, San Diego, La Jolla, CA, USA.ORCID 0000-0001-9797-4722
Eric R SchreiterJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.ORCID 0000-0002-2864-7469
Kaspar PodgorskiJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA. kaspar.podgorski@alleninstitute.org.ORCID 0000-0002-0374-2005
Howard Hughes Medical Institute · USDartmouth College · USUniversity of California San Diego · USMunich Cluster for Systems Neurology · DEJanelia Research Campus · US

Funding

Theory and Modeling of the Orofacial Active SensationU19NS107466 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI WANG, FAN · 2018 to 2022
$14.9M
Project 4U19NS123717 · NINDS · BOSTON UNIVERSITY (CHARLES RIVER CAMPUS) · PI DEVOR, ANNA · 2021 to 2025
$13.4M
Neuronal Cell Biology of Kv2.1-induced Endoplasmic Reticulum/Plasma Membrane Contact sitesR01NS112365 · NINDS · COLORADO STATE UNIVERSITY · PI HOPPA, MICHAEL BLAKE, TAMKUN, MICHAEL M. · 2020 to 2024
$2.0M
Imaging the molecular constituents of the brain vasculature and lymphatic connectomeU24EB028942 · NIBIB · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI KLEINFELD, DAVID · 2019 to 2024
$1.8M
NIBIB NIH HHS U24 EB028942NINDS NIH HHS R01 NS112365NINDS NIH HHS U19 NS107466NINDS NIH HHS U19 NS123717
6 · The paper itself

Abstract

The fluorescent glutamate indicator iGluSnFR enables imaging of neurotransmission with genetic and molecular specificity. However, existing iGluSnFR variants exhibit low in vivo signal-to-noise ratios, saturating activation kinetics and exclusion from postsynaptic densities. Using a multiassay screen in bacteria, soluble protein and cultured neurons, we generated variants with improved signal-to-noise ratios and kinetics. We developed surface display constructs that improve iGluSnFR's nanoscopic localization to postsynapses. The resulting indicator iGluSnFR3 exhibits rapid nonsaturating activation kinetics and reports synaptic glutamate release with decreased saturation and increased specificity versus extrasynaptic signals in cultured neurons. Simultaneous imaging and electrophysiology at individual boutons in mouse visual cortex showed that iGluSnFR3 transients report single action potentials with high specificity. In vibrissal sensory cortex layer 4, we used iGluSnFR3 to characterize distinct patterns of touch-evoked feedforward input from thalamocortical boutons and both feedforward and recurrent input onto L4 cortical neuron dendritic spines.

Indexed as

Glutamic AcidSynaptic TransmissionAnimalsKineticsMiceNeuronsSynapsesGlutamic Acid

Identifiers

PMID37142767
PMCPMC10250197
OpenAlexW4372331023

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.