Evidence map›Paper›PMID 37141170›Full record

ArticleAmerican journal of clinical pathology2023

Double-stranded RNA immunohistochemistry as a screening tool for viral encephalitis.

Anne Piantadosi, Nima Shariatzadeh, Andrei Bombin, Knarik Arkun, Sanda Alexandrescu, B K Kleinschmidt-DeMasters, Isaac H Solomon

Open access · greenAbstract read
In one paragraph

Article in American journal of clinical pathology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 1 country.

Anne PiantadosiDepartment of Pathology and Laboratory Medicine and Department of Medicine, Division of Infectious Diseases, Emory University School of Medicine, Atlanta, GA, US.ORCID 0000-0002-5942-1534
Nima ShariatzadehDepartment of Pathology and Laboratory Medicine and Department of Medicine, Division of Infectious Diseases, Emory University School of Medicine, Atlanta, GA, US.
Andrei BombinDepartment of Pathology and Laboratory Medicine and Department of Medicine, Division of Infectious Diseases, Emory University School of Medicine, Atlanta, GA, US.
Knarik ArkunDepartment of Pathology and Laboratory Medicine, Tufts University School of Medicine, Boston, MA, US.
Sanda AlexandrescuDepartment of Pathology, Boston Children's Hospital, Harvard Medical School, Boston, MA, US.ORCID 0000-0001-9246-4184
B K Kleinschmidt-DeMastersDepartment of Pathology, University of Colorado School of Medicine, Aurora, Colorado, US.
Isaac H SolomonDepartment of Pathology, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, US.ORCID 0000-0003-3432-0902
Emory University · USBoston Children's Hospital · USBrigham and Women's Hospital · USTufts University · USUniversity of Colorado Denver · US

Funding

VectorP30CA006516 · NCI · DANA-FARBER CANCER INSTITUTE · PI JENNIFER W MACK · 1985 to 2026
$330.6M
Developing a robust platform to identify unexpected and novel viruses in human brain tissueR21NS119660 · NINDS · BRIGHAM AND WOMEN'S HOSPITAL · PI PIANTADOSI, ANNE L, SOLOMON, ISAAC H. · 2020 to 2020
$480k
NCI NIH HHS P30 CA006516NIH HHS R21NS119660NINDS NIH HHS R21 NS119660
6 · The paper itself

Abstract

objectivesViral infections of the central nervous system can be challenging to diagnose because of the wide range of causative agents and nonspecific histologic features. We sought to determine whether detection of double-stranded RNA (dsRNA), produced during active RNA and DNA viral infections, could be used to select cases for metagenomic next-generation sequencing (mNGS) from formalin-fixed, paraffin-embedded brain tissue.

methodsEight commercially available anti-dsRNA antibodies were optimized for immunohistochemistry (IHC) and the top antibody tested in a series of cases with confirmed viral infections (n = 34) and cases with inflammatory brain lesions of unclear etiology (n = 62).

resultsAmong known positives, anti-dsRNA IHC produced a strong cytoplasmic or nuclear staining pattern for Powassan virus, West Nile virus, rabies virus, JC polyoma virus, and adenovirus while failing to detect Eastern equine encephalitis virus, Jamestown Canyon virus, or any herpesvirus. All the unknown cases were negative by anti-dsRNA IHC, while mNGS detected rare viral reads (0.3-1.3 reads per million total reads) in 2 cases (3%), with only 1 having potential clinical significance.

conclusionsAnti-dsRNA IHC can effectively identify a subset of clinically relevant viral infections but not all. The absence of staining should not exclude cases from mNGS if sufficient clinical and histologic suspicion exists.

Indexed as

Encephalitis, ViralWest Nile virusAnimalsHigh-Throughput Nucleotide SequencingHorsesHumansImmunohistochemistryRNA, Double-StrandedRNA, ViralRNA, Double-StrandedRNA, ViraldsRNAmetagenomic sequencingviral encephalitis

Identifiers

PMID37141170
PMCPMC10392367
OpenAlexW4368362152

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.