Evidence map›Paper›PMID 37140382›Full record

ArticleMicrobiology spectrum2023

A Multi-Laboratory Evaluation of Commercial Monkeypox Virus Molecular Tests.

Oran Erster, Itzchak Levy, Areej Kabat, Batya Mannasse, Virginia Levy, Hadar Assraf, Roberto Azar, Haim Ben-Zvi, Ritta Bradenstein, Olga Bunder and 17 more

Open access · goldAbstract read
In one paragraph

Article in Microbiology spectrum, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

27 authors at 17 institutions in 1 country.

Oran ErsterCentral Virology Laboratory, Public Health Services, Ministry of Health, Chaim Sheba Medical Center, Ramat Gan, Israel.ORCID 0000-0003-4839-8997
Itzchak LevyInfectious Diseases Unit, Chaim Sheba Medical Center, Ramat Gan, Israel.
Areej KabatCentral Virology Laboratory, Public Health Services, Ministry of Health, Chaim Sheba Medical Center, Ramat Gan, Israel.
Batya MannasseCentral Virology Laboratory, Public Health Services, Ministry of Health, Chaim Sheba Medical Center, Ramat Gan, Israel.
Virginia LevyCentral Virology Laboratory, Public Health Services, Ministry of Health, Chaim Sheba Medical Center, Ramat Gan, Israel.
Hadar AssrafCentral Virology Laboratory, Public Health Services, Ministry of Health, Chaim Sheba Medical Center, Ramat Gan, Israel.
Roberto AzarCentral Virology Laboratory, Public Health Services, Ministry of Health, Chaim Sheba Medical Center, Ramat Gan, Israel.
Haim Ben-ZviBeilinson-Rabin Medical Center, Petach Tikva, Israel.
Ritta BradensteinKaplan Medical Center, Rehovot, Israel.
Olga BunderShamir Medical Center, Beer Yaacov Zerifin, Israel.
Ayman FadeelaMeir Medical Center, Kfar Sava, Israel.
Ayelet Keren-NausSoroka Medical Center, Be'er Sheva, Israel.
Avi PeretzThe Baruch Padeh Medical Center, Poriya, Tiberias, Israel.ORCID 0000-0002-9012-6015
Diana Roif-KaminskyBarzilai Medical Center, Ashkelon, Israel.
Lolu SalehBeilinson-Rabin Medical Center, Petach Tikva, Israel.
Licita SchreiberMaccabi HealthCare Central Laboratory, Rehovot, Israel.
Orna SchwartzWolfson Medical Center, Holon, Israel.
Pninit Shaked-MishanCarmel Medical Center, Haifa, Israel.
Nadav SorekAssuta Ashdod University Hospital, Ashdod, Israel.
Merav StraussEmek Medical Center, Afula, Israel.
Rachel SteinbergSoroka Medical Center, Be'er Sheva, Israel.
Orit TreygermanMe'uchedet HealthCare Central Laboratory, Lod, Israel.
Simona Zisman-RozenGalilee Medical Center, Nahariya, Israel.
Ruth YishaiDepartment of Laboratories, Public Health Services, Ministry of Health, Jerusalem, Israel.
Noa Tejman-YardenDepartment of Laboratories, Public Health Services, Ministry of Health, Jerusalem, Israel.
Ella MendelsonCentral Virology Laboratory, Public Health Services, Ministry of Health, Chaim Sheba Medical Center, Ramat Gan, Israel.
Danit SoferCentral Virology Laboratory, Public Health Services, Ministry of Health, Chaim Sheba Medical Center, Ramat Gan, Israel.
Sheba Medical Center · ILIsrael Ministry of Health · ILRabin Medical Center · ILSoroka Medical Center · ILAssaf Harofeh Medical Center · ILAssuta Medical Center · ILBar-Ilan University · ILBarzilai Medical Center · ILCarmel Medical Center · ILEmek Medical Center · ILIsrael Aerospace Industries (Israel) · ILKaplan Medical Center · ILMaccabi Healthcare Services · ILMeir Medical Center · ILTel Aviv University · ILWestern Galilee Hospital · ILWolfson Medical Center · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this report, we describe the first national scale multi-laboratory evaluation of monkeypox virus (MPXV) DNA commercial PCR kits. The objective of this study was to evaluate 2 kits by different diagnostic laboratories across Israel. Ten standardized samples were tested simultaneously using the Novaplex (15 laboratories) and Bio-Speedy (seven laboratories) kits. An in-house assay based on previously published reactions was used as reference. Comparison of the results showed high intra-assay agreement between laboratories, with small variations for most samples. The in-house assay had an analytical detection limit of less than 10 copies per reaction. While the 2 commercial kits were able to detect specimens with low viral loads similarly to the in-house assay, significant differences were observed, in the Cq values and relative fluorescence (RF), between the assays. The RF signal of the in-house and Bio-Speedy assays ranged between 5,000 and 10,000 RFU, while the signal in the Novaplex assay was less than 600 RFU. Due to the kit measurement protocol, the Cq values of the Bio-Speedy kit were 5 to 7.5 cycles lower than those of the in-house assay. On the contrary, the Cq values of the Novaplex kit were significantly higher than those of the in-house assay, with differences of 3 to 5 cycles per sample. Our results suggest that while all assays were similar in their overall sensitivity, direct comparison of Cq values between them may be misleading. To our knowledge, this is the first methodical evaluation of commercial MPX test kits. We therefore anticipate that this study would help diagnostic laboratories in choosing a specific MPX detection assay.

Indexed as

LaboratoriesMonkeypox virusPolymerase Chain ReactionSensitivity and SpecificityViral Loadcommercial kitcomparative analysisdetection kitmolecular diagnosticsmonkeypoxPCRreal-time PCRvalidation

Identifiers

PMID37140382
PMCPMC10269769
OpenAlexW4368358908

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.