Evidence map›Paper›PMID 37140047›Full record

ArticleNucleic acids research2023

Crol contributes to PRE-mediated repression and Polycomb group proteins recruitment in Drosophila.

Maksim Erokhin, J Lesley Brown, Dmitry Lomaev, Nadezhda E Vorobyeva, Liangliang Zhang, Lika V Fab, Marina Yu Mazina, Ivan V Kulakovskiy, Rustam H Ziganshin, Paul Schedl and 4 more

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 11 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Science advances · 2024
    Article
  9. Article
  10. Article
  11. Polycomb Recruiters Inside and Outside of the Repressed Domains.International journal of molecular sciences · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 3 countries.

Maksim ErokhinGroup of Chromatin Biology, Institute of Gene Biology, Russian Academy of Sciences, 34/5 Vavilov Street, Moscow 119334, Russia.
J Lesley BrownEunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD 20892, USA.
Dmitry LomaevGroup of Epigenetics, Institute of Gene Biology, Russian Academy of Sciences, 34/5 Vavilov Street, Moscow 119334, Russia.
Nadezhda E VorobyevaGroup of transcriptional complexes dynamics, Institute of Gene Biology, Russian Academy of Sciences, Moscow, Russia.ORCID 0000-0003-4293-834X
Liangliang ZhangInstitute of Comparative Medicine, College of Veterinary Medicine, Yangzhou University, Yangzhou, Jiangsu, China.
Lika V FabGroup of Chromatin Biology, Institute of Gene Biology, Russian Academy of Sciences, 34/5 Vavilov Street, Moscow 119334, Russia.
Marina Yu MazinaGroup of hormone-dependent transcription regulation, Institute of Gene Biology, Russian Academy of Sciences, Moscow, Russia.
Ivan V KulakovskiyVavilov Institute of General Genetics, Russian Academy of Sciences, Moscow119991, Russia.ORCID 0000-0002-6554-8128
Rustam H ZiganshinShemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Moscow 117997, Russia.
Paul SchedlDepartment of Molecular Biology Princeton University, Princeton, NJ 08544, USA.
Pavel GeorgievDepartment of Control of Genetic Processes, Institute of Gene Biology, Russian Academy of Sciences, 34/5 Vavilov Street, Moscow 119334, Russia.ORCID 0000-0002-6509-3194
Ming-An SunInstitute of Comparative Medicine, College of Veterinary Medicine, Yangzhou University, Yangzhou, Jiangsu, China.ORCID 0000-0002-4661-3027
Judith A KassisEunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD 20892, USA.ORCID 0000-0001-9268-3213
Darya ChetverinaGroup of Epigenetics, Institute of Gene Biology, Russian Academy of Sciences, 34/5 Vavilov Street, Moscow 119334, Russia.ORCID 0000-0003-0008-3814
Institute of Gene Biology · RUNational Institutes of Health · USYangzhou University · CNInstitute of Bioorganic Chemistry · RUPrinceton University · USVavilov Institute of General Genetics · RU

Funding

Control Of Gene Expression During DevelopmentZIAHD005003 · NICHD · EUNICE KENNEDY SHRIVER NATIONAL INSTITUTE OF CHILD HEALTH & HUMAN DEVELOPMENT · PI KASSIS, JUDITH ANN · 2009 to 2023
$16.4M
Genetic regulatory mechanism in development and differentiationR35GM126975 · NIGMS · PRINCETON UNIVERSITY · PI SCHEDL, PAUL D · 2018 to 2022
$3.0M
NIGMS NIH HHS R35 GM126975
6 · The paper itself

Abstract

The Polycomb group (PcG) proteins are fundamental epigenetic regulators that control the repressive state of target genes in multicellular organisms. One of the open questions is defining the mechanisms of PcG recruitment to chromatin. In Drosophila, the crucial role in PcG recruitment is thought to belong to DNA-binding proteins associated with Polycomb response elements (PREs). However, current data suggests that not all PRE-binding factors have been identified. Here, we report the identification of the transcription factor Crooked legs (Crol) as a novel PcG recruiter. Crol is a C2H2-type Zinc Finger protein that directly binds to poly(G)-rich DNA sequences. Mutation of Crol binding sites as well as crol CRISPR/Cas9 knockout diminish the repressive activity of PREs in transgenes. Like other PRE-DNA binding proteins, Crol co-localizes with PcG proteins inside and outside of H3K27me3 domains. Crol knockout impairs the recruitment of the PRC1 subunit Polyhomeotic and the PRE-binding protein Combgap at a subset of sites. The decreased binding of PcG proteins is accompanied by dysregulated transcription of target genes. Overall, our study identified Crol as a new important player in PcG recruitment and epigenetic regulation.

Indexed as

DrosophilaDrosophila ProteinsTranscription FactorsAnimalsChromatinDNA-Binding ProteinsEpigenesis, GeneticGene Expression Regulation, DevelopmentalPolycomb-Group ProteinsChromatincrol protein, DrosophilaDNA-Binding ProteinsDrosophila ProteinsPolycomb-Group ProteinsTranscription Factors

Identifiers

PMID37140047
PMCPMC10325914
OpenAlexW4368356025

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.