Evidence map›Paper›PMID 37139763›Full record

ArticleSheng wu yi xue gong cheng xue za zhi = Journal of biomedical engineering = Shengwu yixue gongchengxue zazhi2023

[MinerVa: A high performance bioinformatic algorithm for the detection of minimal residual disease in solid tumors].

Piao Yang, Yaxi Zhang, Liang Xia, Jiandong Mei, Rui Fan, Yu Huang, Lunxu Liu, Weizhi Chen

Open access · greenAbstract readEnglish Abstract
In one paragraph

Article in Sheng wu yi xue gong cheng xue za zhi = Journal of biomedical engineering = Shengwu yixue gongchengxue zazhi, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Piao YangGenecast Biotechnology Co., Ltd, Wuxi, Jiangsu 214000, P. R. China.
Yaxi ZhangGenecast Biotechnology Co., Ltd, Wuxi, Jiangsu 214000, P. R. China.
Liang XiaDepartment of Thoracic Surgery, West China Hospital, Sichuan University, Chengdu 610041, P. R. China.
Jiandong MeiDepartment of Thoracic Surgery, West China Hospital, Sichuan University, Chengdu 610041, P. R. China.
Rui FanGenecast Biotechnology Co., Ltd, Wuxi, Jiangsu 214000, P. R. China.
Yu HuangGenecast Biotechnology Co., Ltd, Wuxi, Jiangsu 214000, P. R. China.
Lunxu LiuDepartment of Thoracic Surgery, West China Hospital, Sichuan University, Chengdu 610041, P. R. China.
Weizhi ChenGenecast Biotechnology Co., Ltd, Wuxi, Jiangsu 214000, P. R. China.
Sichuan University · CNWest China Hospital of Sichuan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

How to improve the performance of circulating tumor DNA (ctDNA) signal acquisition and the accuracy to authenticate ultra low-frequency mutation are major challenges of minimal residual disease (MRD) detection in solid tumors. In this study, we developed a new MRD bioinformatics algorithm, namely multi-variant joint confidence analysis (MinerVa), and tested this algorithm both in contrived ctDNA standards and plasma DNA samples of patients with early non-small cell lung cancer (NSCLC). Our results showed that the specificity of multi-variant tracking of MinerVa algorithm ranged from 99.62% to 99.70%, and when tracking 30 variants, variant signals could be detected as low as 6.3 × 10

Indexed as

Carcinoma, Non-Small-Cell LungLung NeoplasmsBiomarkers, TumorComputational BiologyHumansNeoplasm, ResidualBiomarkers, TumorCirculating tumor DNAMinimal residual diseaseMulti-variant joint confidence analysisSingle-base resolutionTechnical noise baseline

Identifiers

PMID37139763
PMCPMC10162919
OpenAlexW4368360992

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.