Evidence map›Paper›PMID 37139645›Full record

ArticleThe plant genome2023

Efficacy of plant breeding using genomic information.

Osval A Montesinos-López, Alison R Bentley, Carolina Saint Pierre, Leonardo Crespo-Herrera, Leonardo Rebollar-Ruellas, Patricia Edwigis Valladares-Celis, Morten Lillemo, Abelardo Montesinos-López, José Crossa

Abstract read
In one paragraph

Article in The plant genome, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Osval A Montesinos-LópezFacultad de Telemática, Universidad de Colima, Colima, México.ORCID 0000-0002-3973-6547
Alison R BentleyInternational Maize and Wheat Improvement Center (CIMMYT), Estado de México, México.ORCID 0000-0001-5519-4357
Carolina Saint PierreInternational Maize and Wheat Improvement Center (CIMMYT), Estado de México, México.ORCID 0000-0003-1291-7468
Leonardo Crespo-HerreraInternational Maize and Wheat Improvement Center (CIMMYT), Estado de México, México.
Leonardo Rebollar-RuellasIndependent consultant, Colima, México.
Patricia Edwigis Valladares-CelisBachillerato 22, Universidad de Colima, Cuauhtémoc, Colima, México.
Morten LillemoDepartment of Plant Sciences, Norwegian University of Life Sciences, Ås, Norway.ORCID 0000-0002-8594-8794
Abelardo Montesinos-LópezCentro Universitario de Ciencias Exactas e Ingenierías (CUCEI), Universidad de Guadalajara, Guadalajara, Jalisco, México.
José CrossaInternational Maize and Wheat Improvement Center (CIMMYT), Estado de México, México.ORCID 0000-0001-9429-5855

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genomic selection (GS) proposed by Meuwissen et al. more than 20 years ago, is revolutionizing plant and animal breeding. Although GS has been widely accepted and applied to plant and animal breeding, there are many factors affecting its efficacy. We studied 14 real datasets to respond to the practical question of whether the accuracy of genomic prediction increases when considering genomic as compared with not using genomic. We found across traits, environments, datasets, and metrics, that the average gain in prediction accuracy when genomic information is considered was 26.31%, while only in terms of Pearson's correlation the gain was of 46.1%, while only in terms of normalized root mean squared error the gain was of 6.6%. If the quality of the makers and relatedness of the individuals increase, major gains in prediction accuracy can be obtained, but if these two factors decrease, a lower increase is possible. Finally, our findings reinforce genomic is vital for improving the prediction accuracy and, therefore, the realized genetic gain in genomic assisted plant breeding programs.

Indexed as

Plant BreedingSelection, GeneticAnimalsGenomeGenomicsModels, Genetic

Identifiers

PMID37139645
PMCPMC12807367

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.