Evidence map›Paper›PMID 37137383›Full record

ArticleMolecular and cellular neurosciences2023

Epigenomic profiling of mouse nucleus accumbens at single-cell resolution.

Parth Bhatia, Lite Yang, Jay X J Luo, Mengyi Xu, William Renthal

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular neurosciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Parth BhatiaDepartment of Neurology, Brigham and Women's Hospital, Harvard Medical School, USA.
Lite YangDepartment of Neurology, Brigham and Women's Hospital, Harvard Medical School, USA.
Jay X J LuoDepartment of Neurology, Brigham and Women's Hospital, Harvard Medical School, USA.
Mengyi XuDepartment of Neurology, Brigham and Women's Hospital, Harvard Medical School, USA.
William RenthalDepartment of Neurology, Brigham and Women's Hospital, Harvard Medical School, USA. Electronic address: wrenthal@bwh.harvard.edu.
Brigham and Women's Hospital · US

Funding

Epigenomic labeling of cells that drive drug abuse behaviorDP1DA054343 · NIDA · BRIGHAM AND WOMEN'S HOSPITAL · PI RENTHAL, WILLIAM RUSSELL · 2021 to 2025
$2.7M
NIDA NIH HHS DP1 DA054343
6 · The paper itself

Abstract

The nucleus accumbens (NAc) is a key brain region involved in reward processing and is linked to multiple neuropsychiatric conditions such as substance use disorder, depression, and chronic pain. Recent studies have begun to investigate NAc gene expression at a single-cell resolution, however, our understanding of the cellular heterogeneity of the NAc epigenomic landscape remains limited. In this study, we utilize single-nucleus assay for transposase-accessible chromatin using sequencing (snATAC-seq) to map cell-type-specific differences in chromatin accessibility in the NAc. Our findings not only reveal the transcription factors and putative gene regulatory elements that may contribute to these cell-type-specific epigenomic differences but also provide a valuable resource for future studies investigating epigenomic changes that occur in neuropsychiatric disorders.

Indexed as

EpigenomicsNucleus AccumbensAnimalsBrainChromatinMiceTranscription FactorsChromatinTranscription FactorsEnhancersEpigenomicsGene regulationNucleus accumbens

Identifiers

PMID37137383
PMCPMC10525004
OpenAlexW4367607618

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.