Evidence map›Paper›PMID 37133720›Full record

ArticleGenes & genomics2023

Application of RapidHIT™ ID for cell authentication by fast and convenient STR profiling.

Un Na Koh, Ji Hyun Lee, Hyoung Jin Kang, Kyeung Min Joo, Jae Cheol Lee, Si-Keun Lim

Abstract read
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In one paragraph

Article in Genes & genomics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Current issues in forensic genetics.Genes & genomics · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Un Na KohDepartment of Forensic Sciences, Sungkyunkwan University, Suwon, South Korea.ORCID http://orcid.org/0000-0002-8089-9022
Ji Hyun LeeThermo Fisher Scientific Korea, Seoul, South Korea.
Hyoung Jin KangDepartment of Pediatrics, Seoul National University College of Medicine, Seoul, South Korea.
Kyeung Min JooBiomedical Institute for Convergence at Sungkyunkwan University (BICS), Sungkyunkwan University, Suwon, South Korea.
Jae Cheol LeeBiomedical Institute for Convergence at Sungkyunkwan University (BICS), Sungkyunkwan University, Suwon, South Korea.
Si-Keun LimDepartment of Forensic Sciences, Sungkyunkwan University, Suwon, South Korea. sikeun.lim@skku.edu.ORCID http://orcid.org/0000-0003-4246-6223
Sungkyunkwan University · KRSamsung Medical Center · KRSeoul National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAs cell therapies are injected directly into the body, cell authentication is essential. Short tandem repeat (STR) profiling is used for human identification in forensics as well as for cell authentication. The standard methodology (DNA extraction, quantification, polymerase chain reaction, and capillary electrophoresis) takes at least 6 h and requires several instruments to obtain an STR profile. RapidHIT™ ID is a single automated instrument that provides an STR profile in 90 min.

objectiveIn this study, we aimed to propose a method to use RapidHIT™ ID for cell authentication.

methodsFour types of cells which are used for cell therapy or in the production process were used. The sensitivity of STR profiling was compared by the cell type and cell count using RapidHIT™ ID. Moreover, the effect of preservation solutions, pre-treatment with cell lysis solution, proteinase K, Flinders Technology Associates (FTA) cards, and dried or wet cotton swabs (with a single cell type or a mixture of two) were examined. The results were compared to those obtained by the standard methodology using genetic analyzer ThermoFisher SeqStudio.

resultsWe accomplished a high sensitivity through our proposed method that can benefit cytology laboratories. Although the pre-treatment process affected the quality of the STR profile, other variables did not significantly affect STR profiling.

conclusionAs a result of the experiment, RapidHIT™ ID can be used as a faster and simpler instrument for cell authentication.

Indexed as

DNA FingerprintingMicrosatellite RepeatsHumansPolymerase Chain ReactionReproducibility of ResultsCellCell authenticationRapidHIT™ ID systemSTR

Identifiers

PMID37133720
OpenAlexW4367834835

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.