Evidence map›Paper›PMID 37131620›Full record

ArticleResearch square2023

Evolutionary paths that link orthogonal pairs of binding proteins.

Ziv Avizemer, Carlos Martí-Gómez, Shlomo Yakir Hoch, David M McCandlish, Sarel J Fleishman

Abstract readPreprint
In one paragraph

Article in Research square, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Ziv AvizemerDepartment of Biomolecular Sciences, Weizmann Institute of Science, 7610001, Rehovot, Israel.
Carlos Martí-GómezSimons Center for Quantitative Biology, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724.ORCID 0000-0002-2042-843X
Shlomo Yakir HochDepartment of Biomolecular Sciences, Weizmann Institute of Science, 7610001, Rehovot, Israel.
David M McCandlishSimons Center for Quantitative Biology, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724.
Sarel J FleishmanDepartment of Biomolecular Sciences, Weizmann Institute of Science, 7610001, Rehovot, Israel.

Funding

Computational analysis of complex genetic interactionsR35GM133613 · NIGMS · COLD SPRING HARBOR LABORATORY · PI David Martin McCandlish · 2019 to 2026
$3.5M
NIGMS NIH HHS R35 GM133613
6 · The paper itself

Abstract

Some protein binding pairs exhibit extreme specificities that functionally insulate them from homologs. Such pairs evolve mostly by accumulating single-point mutations, and mutants are selected if their affinity exceeds the threshold required for function

Indexed as

Epistasisevolutionorthogonalityprotein designprotein-protein interactionsRosettatness landscape

Identifiers

PMID37131620
PMCPMC10153392

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.