Evidence map›Paper›PMID 37129998›Full record

ArticleEMBO reports2023

Mechanism of 5S RNP recruitment and helicase-surveilled rRNA maturation during pre-60S biogenesis.

Benjamin Lau, Zixuan Huang, Nikola Kellner, Shuangshuang Niu, Otto Berninghausen, Roland Beckmann, Ed Hurt, Jingdong Cheng

Open access · greenAbstract read
In one paragraph

Article in EMBO reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. RiboScreenBiomedicines · 2026
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 3 countries.

Benjamin Lau *Heidelberg University Biochemistry Center (BZH), Heidelberg, Germany.ORCID 0000-0002-7615-1046
Zixuan Huang *Minhang Hospital & Institutes of Biomedical Sciences, Shanghai Key Laboratory of Medical Epigenetics, International Co-laboratory of Medical Epigenetics and Metabolism, Fudan University, Shanghai, China.ORCID 0000-0001-6483-6606
Nikola KellnerHeidelberg University Biochemistry Center (BZH), Heidelberg, Germany.
Shuangshuang NiuGene Center, Ludwig-Maximilians-Universität München, Munich, Germany.
Otto BerninghausenGene Center, Ludwig-Maximilians-Universität München, Munich, Germany.
Roland BeckmannGene Center, Ludwig-Maximilians-Universität München, Munich, Germany.ORCID 0000-0003-4291-3898
Ed HurtHeidelberg University Biochemistry Center (BZH), Heidelberg, Germany.ORCID 0000-0002-4535-8255
Jingdong ChengMinhang Hospital & Institutes of Biomedical Sciences, Shanghai Key Laboratory of Medical Epigenetics, International Co-laboratory of Medical Epigenetics and Metabolism, Fudan University, Shanghai, China.ORCID 0000-0003-4442-377X
Heidelberg University · DELudwig-Maximilians-Universität München · DEFudan University · CN

Funding

European Research Council 885711
6 · The paper itself

Abstract

Ribosome biogenesis proceeds along a multifaceted pathway from the nucleolus to the cytoplasm that is extensively coupled to several quality control mechanisms. However, the mode by which 5S ribosomal RNA is incorporated into the developing pre-60S ribosome, which in humans links ribosome biogenesis to cell proliferation by surveillance by factors such as p53-MDM2, is poorly understood. Here, we report nine nucleolar pre-60S cryo-EM structures from Chaetomium thermophilum, one of which clarifies the mechanism of 5S RNP incorporation into the early pre-60S. Successive assembly states then represent how helicases Dbp10 and Spb4, and the Pumilio domain factor Puf6 act in series to surveil the gradual folding of the nearby 25S rRNA domain IV. Finally, the methyltransferase Spb1 methylates a universally conserved guanine nucleotide in the A-loop of the peptidyl transferase center, thereby licensing further maturation. Our findings provide insight into the hierarchical action of helicases in safeguarding rRNA tertiary structure folding and coupling to surveillance mechanisms that culminate in local RNA modification.

Indexed as

RNA, RibosomalSaccharomyces cerevisiae ProteinsDNA HelicasesHumansProtein BindingRibosomal ProteinsRibosomesRNA, Ribosomal, 5SDNA HelicasesRibosomal ProteinsRNA, RibosomalRNA, Ribosomal, 5SSaccharomyces cerevisiae Proteins5S RNP/Dbp10pre-60S ribosomeribosomeribosome biogenesis

Identifiers

PMID37129998
PMCPMC10328080
OpenAlexW4367668495

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.