Evidence map›Paper›PMID 37129971›Full record

ArticleJCI insight2023

Single-cell landscape analysis unravels molecular programming of the human B cell compartment in chronic GVHD.

Jonathan C Poe, Jiyuan Fang, Dadong Zhang, Marissa R Lee, Rachel A DiCioccio, Hsuan Su, Xiaodi Qin, Jennifer Y Zhang, Jonathan Visentin, Sonali J Bracken and 16 more

Open access · goldAbstract read
In one paragraph

Article in JCI insight, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 19 citations in OpenAlex.

  1. Trial
  2. Human CD21Journal of human immunity · 2026
    Review
  3. Chronic graft-versus-host disease.Nature reviews. Disease primers · 2026
    Review
  4. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors at 7 institutions in 3 countries.

Jonathan C PoeDepartment of Medicine, Division of Hematologic Malignancies and Cellular Therapy, and.
Jiyuan FangDepartment of Biostatistics and Bioinformatics, Duke University Medical Center, Durham, North Carolina, USA.
Dadong ZhangDuke Cancer Institute, Durham, North Carolina, USA.
Marissa R LeeDepartment of Biostatistics and Bioinformatics, Duke University Medical Center, Durham, North Carolina, USA.
Rachel A DiCioccioDepartment of Medicine, Division of Hematologic Malignancies and Cellular Therapy, and.
Hsuan SuDepartment of Medicine, Division of Hematologic Malignancies and Cellular Therapy, and.
Xiaodi QinDuke Cancer Institute, Durham, North Carolina, USA.
Jennifer Y ZhangDepartment of Dermatology, Duke University Medical Center, Durham, North Carolina, USA.
Jonathan VisentinDepartment of Medicine, Division of Hematologic Malignancies and Cellular Therapy, and.
Sonali J BrackenDepartment of Medicine, Division of Rheumatology and Immunology, Duke University Medical Center, Durham, North Carolina, USA.
Vincent T HoDivision of Hematologic Malignancies and Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts, USA.
Kathy S WangDivision of Hematologic Malignancies and Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts, USA.
Jeremy J RoseExperimental Transplantation and Immunology Branch, National Cancer Institute, NIH, Bethesda, Maryland, USA.
Steven Z PavleticExperimental Transplantation and Immunology Branch, National Cancer Institute, NIH, Bethesda, Maryland, USA.
Frances T HakimExperimental Transplantation and Immunology Branch, National Cancer Institute, NIH, Bethesda, Maryland, USA.
Wei JiaDepartment of Medicine, Division of Hematologic Malignancies and Cellular Therapy, and.
Amy N SuthersDepartment of Medicine, Division of Hematologic Malignancies and Cellular Therapy, and.
Itaevia M Curry-ChisolmDepartment of Medicine, Division of Hematologic Malignancies and Cellular Therapy, and.
Mitchell E HorwitzDepartment of Medicine, Division of Hematologic Malignancies and Cellular Therapy, and.
David A RizzieriDepartment of Medicine, Division of Hematologic Malignancies and Cellular Therapy, and.
William C McManigleDepartment of Medicine, Division of Hematologic Malignancies and Cellular Therapy, and.
Nelson J ChaoDepartment of Medicine, Division of Hematologic Malignancies and Cellular Therapy, and.
Adela R CardonesDepartment of Dermatology, Duke University Medical Center, Durham, North Carolina, USA.
Jichun XieDepartment of Biostatistics and Bioinformatics, Duke University Medical Center, Durham, North Carolina, USA.
Kouros OwzarDepartment of Biostatistics and Bioinformatics, Duke University Medical Center, Durham, North Carolina, USA.
Stefanie SarantopoulosDepartment of Medicine, Division of Hematologic Malignancies and Cellular Therapy, and.
Cellular Therapeutics (United Kingdom) · GBDuke University · USDuke Medical Center · USNational Cancer Institute · USDana-Farber Cancer Institute · USDuke Cancer InstituteCentre National de la Recherche Scientifique · FR

Funding

NIH Chronic GVHD Study GroupZIABC011743 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI PAVLETIC, STEVEN · 2016 to 2025
$10.2M
Pathological B Cells: Novel Strategies to Prevent and Treat Chronic GVHDR01HL129061 · NHLBI · DUKE UNIVERSITY · PI Stefanie Sarantopoulos · 2015 to 2026
$7.7M
Stimulating Access to Research in Residency (StARR) - NIAIDR38AI140297 · NIAID · DUKE UNIVERSITY · PI Rachel G Greenberg, David H. Harpole · 2018 to 2026
$2.4M
Keratinocyte targeted strategies for treatment of cutaneous GVHDR21CA223419 · NCI · DUKE UNIVERSITY · PI CARDONES, ADELA RAMBI, ZHANG, JENNIFER YUNYAN · 2019 to 2020
$384k
NCI NIH HHS R21 CA223419NHLBI NIH HHS R01 HL129061NIAID NIH HHS R38 AI140297
6 · The paper itself

Abstract

Alloreactivity can drive autoimmune syndromes. After allogeneic hematopoietic stem cell transplantation (allo-HCT), chronic graft-versus-host disease (cGVHD), a B cell-associated autoimmune-like syndrome, commonly occurs. Because donor-derived B cells continually develop under selective pressure from host alloantigens, aberrant B cell receptor (BCR) activation and IgG production can emerge and contribute to cGVHD pathobiology. To better understand molecular programing of B cells in allo-HCT, we performed scRNA-Seq analysis on high numbers of purified B cells from patients. An unsupervised analysis revealed 10 clusters, distinguishable by signature genes for maturation, activation, and memory. Within the memory B cell compartment, we found striking transcriptional differences in allo-HCT patients compared with healthy or infected individuals, including potentially pathogenic atypical B cells (ABCs) that were expanded in active cGVHD. To identify intrinsic alterations in potentially pathological B cells, we interrogated all clusters for differentially expressed genes (DEGs) in active cGVHD versus patients who never had signs of immune tolerance loss (no cGVHD). Active cGVHD DEGs occurred in both naive and BCR-activated B cell clusters. Remarkably, some DEGs occurred across most clusters, suggesting common molecular programs that may promote B cell plasticity. Our study of human allo-HCT and cGVHD provides understanding of altered B cell memory during chronic alloantigen stimulation.

Indexed as

Bronchiolitis Obliterans SyndromeGraft vs Host DiseaseHematopoietic Stem Cell TransplantationB-LymphocytesHumansReceptors, Antigen, B-CellReceptors, Antigen, B-CellAutoimmune diseasesBone marrow transplantationImmunologyTolerance

Identifiers

PMID37129971
PMCPMC10393230
OpenAlexW4367669004

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.