Evidence map›Paper›PMID 37129560›Full record

ArticleImmunoHorizons2023

Dual TCR-Expressing T Cells in Cancer: How Single-Cell Technologies Enable New Investigation.

Elizabeth M Muhowski, Laura M Rogers

Open access · goldAbstract read
In one paragraph

Article in ImmunoHorizons, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 12 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Review
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Elizabeth M MuhowskiDepartment of Immunology, Mayo Clinic, Rochester, MN.ORCID 0000-0002-6903-0668
Laura M RogersDepartment of Immunology, Mayo Clinic, Rochester, MN.ORCID 0000-0003-0861-3269
Mayo Clinic in Arizona · US

Funding

Aak1 to increase infiltration of adoptively transferred cells into solid tumorsR37CA276005 · NCI · MAYO CLINIC ROCHESTER · PI Laura Marie Rogers · 2023 to 2026
$1.8M
NCI NIH HHS R37 CA276005
6 · The paper itself

Abstract

TCR diversity measures are often used to understand the immune response in cancer. Traditional measures of diversity rely on bulk RNA sequencing (RNAseq) of the β-chain variable regions. However, the full αβ TCR repertoire is a combination of both the α- and β-chains, which are encoded by separate genes. In contrast with bulk RNAseq, single-cell RNAseq (scRNAseq) allows paired chain analyses, yielding a more accurate measure of the repertoire. Interestingly, ∼30% of mature peripheral T cells express multiple TCR alleles (e.g., two α-chains) and may exhibit dual Ag specificity. scRNAseq has become increasingly common, and data from both human and animal studies are publicly available. However, routine workflows discard secondary TCR alleles and focus on a single TCR clone per cell. This perspectives piece emphasizes why this may not be good practice and highlights unanswered questions in the field of T cell dual specificity.

Indexed as

NeoplasmsReceptors, Antigen, T-Cell, alpha-betaAnimalsBase SequenceClone CellsHumansT-LymphocytesReceptors, Antigen, T-Cell, alpha-beta

Identifiers

PMID37129560
PMCPMC10354877
OpenAlexW4367669058

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.