Evidence map›Paper›PMID 37129359›Full record

ArticleThe British journal of radiology2023

Evaluation of the dataset quality in gamma passing rate predictions using machine learning methods.

Paulo Quintero, David Benoit, Yongqiang Cheng, Craig Moore, Andrew Beavis

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Article in The British journal of radiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Paulo QuinteroFaculty of Science and Engineering, University of Hull, Hull, United Kingdom.ORCID 0000-0001-6574-1828
David BenoitFaculty of Science and Engineering, University of Hull, Hull, United Kingdom.
Yongqiang ChengFaculty of Science and Engineering, University of Hull, Hull, United Kingdom.
Craig MooreMedical Physics Service, Castle Hill Hospital, Hull University Teaching Hospitals NHS Trust, Castle Road, Hull, United Kingdom.
Andrew BeavisFaculty of Science and Engineering, University of Hull, Hull, United Kingdom.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveGamma passing rate (GPR) predictions using machine learning methods have been explored for treatment verification of radiotherapy plans. However, these methods presented datasets with unbalanced number of plans having different treatment conditions (heterogeneous datasets), such as anatomical sites or dose per fractions, leading to lower model interpretability and prediction performance.

methodsWe investigated the impact of the dataset composition on GPR binary classification (pass/fail) using random forest (RF), XG-boost, and neural network (NN) models. 945 plans were used to create one reference dataset (randomly assembled) and 24 customized datasets that considered four heterogeneity factors independently (anatomical region, number of arcs, dose per fraction, and treatment unit). 309 predictor features were extracted and calculated from plan parameters, modulation complexity metrics, and radiomic analysis (leave-trajectory maps, 3D dose distributions, and portal dosimetry images). The models' performances were measured using the area under the curve from the receiver operating characteristic (ROC-AUC).

resultsRadiomics features for reference models increased ROC-AUC values up to 13%, 15%, and 5% for RF, XG-Boost, and NN, respectively. The datasets with higher heterogeneous conditions presented the lower ROC-AUC values (RF: 0.72 ± 0.11, XG-Boost: 0.67 ± 0.1, NN: 0.89 ± 0.05) compared to models with less heterogeneous treatment conditions (RF: 0.88 ± 0.06, XG-Boost: 0.89 ± 0.07, NN: 0.98 ± 0.01). The ten most important features for each heterogeneity dataset group demonstrated their correlation with the treatments' physical aspects and GPR prediction.

conclusionImprovements in data generalization and model performances can be associated with datasets having similar treatment conditions. This analysis might be implemented to evaluate the dataset quality and model consistency of further ML applications in radiotherapy. ADVANCES IN KNOWLEDGE: Dataset heterogeneities decrease ML model performance and reliability.

Indexed as

Machine LearningNeural Networks, ComputerHumansReproducibility of ResultsROC Curve

Identifiers

PMID37129359
PMCPMC10321263

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.