Evidence map›Paper›PMID 37127754›Full record

ArticleNature chemical biology2023

Acetyl-CoA biosynthesis drives resistance to histone acetyltransferase inhibition.

Timothy R Bishop, Chitra Subramanian, Eric M Bilotta, Leopold Garnar-Wortzel, Anissa R Ramos, Yuxiang Zhang, Joshua N Asiaban, Christopher J Ott, Charles O Rock, Michael A Erb

Registry-linked trialOpen access · greenAbstract read
In one paragraph

Article in Nature chemical biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT04606446 (A PHASE 1/2A DOSE ESCALATION AND EXPANSION STUDY TO EVALUATE SAFETY, TOLERABILITY, PHARMACOKINETIC, PHARMACODYNAMIC, AND ANTI-TUMOR ACTIVITY OF PF-07248144 IN PARTICIPANTS WITH ADVANCED OR METASTATIC SOLID TUMORS), which is not on this map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
5.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT04606446 phase2recruitingnot on this map

A phase 1/2a dose escalation and expansion study to evaluate safety, tolerability, pharmacokinetic, pharmacodynamic, and anti-tumor activity of pf-07248144 in participants with advanced or metastatic solid tumors

TypeinterventionalSponsorPfizerRan2020 to 2029Enrolled320ConditionsLocally Advanced or Metastatic ER+ HER2- Breast Cancer, Locally Advanced or Metastatic Castration-resistant Prostate Cancer, Locally Advanced or Metastatic Non-small Cell Lung CancerArmsPF-07248144, Fulvestrant, Letrozole, Palbociclib, PF-07220060
3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 33 citations in OpenAlex.

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  18. Targeting lysine acetylation readers and writers.Nature reviews. Drug discovery · 2025
    Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Timothy R BishopDepartment of Chemistry, The Scripps Research Institute, La Jolla, CA, USA.ORCID http://orcid.org/0000-0002-0321-7809
Chitra SubramanianDepartment of Infectious Diseases, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID http://orcid.org/0000-0003-1101-5307
Eric M BilottaDepartment of Chemistry, The Scripps Research Institute, La Jolla, CA, USA.ORCID http://orcid.org/0000-0001-7609-3037
Leopold Garnar-WortzelDepartment of Chemistry, The Scripps Research Institute, La Jolla, CA, USA.ORCID http://orcid.org/0000-0001-5055-7817
Anissa R RamosDepartment of Chemistry, The Scripps Research Institute, La Jolla, CA, USA.
Yuxiang ZhangDepartment of Chemistry, The Scripps Research Institute, La Jolla, CA, USA.
Joshua N AsiabanDepartment of Chemistry, The Scripps Research Institute, La Jolla, CA, USA.
Christopher J OttMassachusetts General Hospital Cancer Center, Charlestown, MA, USA.ORCID http://orcid.org/0000-0001-6142-7241
Charles O RockDepartment of Infectious Diseases, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID http://orcid.org/0000-0001-8648-4189
Michael A ErbDepartment of Chemistry, The Scripps Research Institute, La Jolla, CA, USA. michaelerb@scripps.edu.ORCID http://orcid.org/0000-0001-9993-3481
Scripps Research Institute · USSt. Jude Children's Research Hospital · USHarvard University · US

Funding

Viral Vector Technology (VVTSR)P30CA021765 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI Gregory Armstrong · 1985 to 2026
$166.9M
Targeting crotonyl-lysine chromatin readers to disrupt pathogenic gene expression in leukemiaDP5OD026380 · OD · SCRIPPS RESEARCH INSTITUTE, THE · PI ERB, MICHAEL A · 2018 to 2022
$2.4M
NCI NIH HHS P30 CA021765NIH HHS DP5 OD026380
6 · The paper itself

Abstract

Histone acetyltransferases (HATs) are implicated as both oncogene and nononcogene dependencies in diverse human cancers. Acetyl-CoA-competitive HAT inhibitors have emerged as potential cancer therapeutics and the first clinical trial for this class of drugs is ongoing (NCT04606446). Despite these developments, the potential mechanisms of therapeutic response and evolved drug resistance remain poorly understood. Having discovered that multiple regulators of de novo coenzyme A (CoA) biosynthesis can modulate sensitivity to CBP/p300 HAT inhibition (PANK3, PANK4 and SLC5A6), we determined that elevated acetyl-CoA concentrations can outcompete drug-target engagement to elicit acquired drug resistance. This not only affects structurally diverse CBP/p300 HAT inhibitors, but also agents related to an investigational KAT6A/B HAT inhibitor that is currently in Phase 1 clinical trials. Altogether, this work uncovers CoA metabolism as an unexpected liability of anticancer HAT inhibitors and will therefore buoy future efforts to optimize the efficacy of this new form of targeted therapy.

Indexed as

Histone AcetyltransferasesNeoplasmsAcetyl Coenzyme AHumansp300-CBP Transcription FactorsProtein BindingAcetyl Coenzyme AHistone AcetyltransferasesKAT6A protein, humanp300-CBP Transcription Factors

Identifiers

PMID37127754
PMCPMC10538425
OpenAlexW4367599184

What OpenQuestion holds

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Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.