Evidence map›Paper›PMID 37127630›Full record

ArticleGenes and environment : the official journal of the Japanese Environmental Mutagen Society2023

Genome-wide expression analysis reveals different heat shock responses in indigenous (Bos indicus) and crossbred (Bos indicus X Bos taurus) cattle.

Basavaraj Sajjanar, Mohd Tanzeel Aalam, Owais Khan, Gunturu Narasimha Tanuj, Aditya Prasad Sahoo, Gundallahalli B Manjunathareddy, Ravi Kumar Gandham, Sujoy K Dhara, Praveen K Gupta, Bishnu Prasad Mishra and 2 more

Open access · goldAbstract read
In one paragraph

Article in Genes and environment : the official journal of the Japanese Environmental Mutagen Society, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.1field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Basavaraj SajjanarVeterinary Biotechnology Division, ICAR-Indian Veterinary Research Institute, Izatnagar, Bareilly, 243122, Uttar Pradesh, India. basavaraj.sajjanar@icar.gov.in.ORCID http://orcid.org/0000-0003-1716-0062
Mohd Tanzeel AalamVeterinary Biotechnology Division, ICAR-Indian Veterinary Research Institute, Izatnagar, Bareilly, 243122, Uttar Pradesh, India.
Owais KhanVeterinary Biotechnology Division, ICAR-Indian Veterinary Research Institute, Izatnagar, Bareilly, 243122, Uttar Pradesh, India.
Gunturu Narasimha TanujVeterinary Biotechnology Division, ICAR-Indian Veterinary Research Institute, Izatnagar, Bareilly, 243122, Uttar Pradesh, India.
Aditya Prasad SahooICAR- Directorate of Foot and Mouth Disease, Bhubaneswar, 752050, Odisha, India.
Gundallahalli B ManjunathareddyICAR-National Institute of Veterinary Epidemiology and Disease Informatics, Yelahanka, 560064, Karnataka, India.
Ravi Kumar GandhamVeterinary Biotechnology Division, ICAR-Indian Veterinary Research Institute, Izatnagar, Bareilly, 243122, Uttar Pradesh, India.
Sujoy K DharaVeterinary Biotechnology Division, ICAR-Indian Veterinary Research Institute, Izatnagar, Bareilly, 243122, Uttar Pradesh, India.
Praveen K GuptaVeterinary Biotechnology Division, ICAR-Indian Veterinary Research Institute, Izatnagar, Bareilly, 243122, Uttar Pradesh, India.
Bishnu Prasad MishraICAR-National Bureau of Animal Genetic Resources, Karnal, 132001, Haryana, India.
Triveni DuttVeterinary Biotechnology Division, ICAR-Indian Veterinary Research Institute, Izatnagar, Bareilly, 243122, Uttar Pradesh, India.
Gyanendra SinghPhysiology and Climatology Division, ICAR-Indian Veterinary Research Institute, Izatnagar, Bareilly, 243122, Uttar Pradesh, India. gyansidd@gmail.com.
Indian Veterinary Research Institute · INNational Bureau of Animal Genetic Resources · INNational Institute Of Veterinary Epidemiology And Disease Informatics · INProject Directorate on Foot and Mouth Disease · IN

Funding

DST-SERB,Govt of India CRG/2019/005515
6 · The paper itself

Abstract

Environmental heat stress in dairy cattle leads to poor health, reduced milk production and decreased reproductive efficiency. Multiple genes interact and coordinate the response to overcome the impact of heat stress. The present study identified heat shock regulated genes in the peripheral blood mononuclear cells (PBMC). Genome-wide expression patterns for cellular stress response were compared between two genetically distinct groups of cattle viz., Hariana (B. indicus) and Vrindavani (B. indicus X B. taurus). In addition to major heat shock response genes, oxidative stress and immune response genes were also found to be affected by heat stress. Heat shock proteins such as HSPH1, HSPB8, FKB4, DNAJ4 and SERPINH1 were up-regulated at higher fold change in Vrindavani compared to Hariana cattle. The oxidative stress response genes (HMOX1, BNIP3, RHOB and VEGFA) and immune response genes (FSOB, GADD45B and JUN) were up-regulated in Vrindavani whereas the same were down-regulated in Hariana cattle. The enrichment analysis of dysregulated genes revealed the biological functions and signaling pathways that were affected by heat stress. Overall, these results show distinct cellular responses to heat stress in two different genetic groups of cattle. This also highlight the long-term adaptation of B. indicus (Hariana) to tropical climate as compared to the crossbred (Vrindavani) with mixed genetic makeup (B. indicus X B. taurus).

Indexed as

Dairy cattleGene expressionHeat stressImmune response

Identifiers

PMID37127630
PMCPMC10152620
OpenAlexW4367625949

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.