Evidence map›Paper›PMID 37127571›Full record

ArticleBMC genomics2023

Phylogeny of the plant receptor-like kinase (RLK) gene family and expression analysis of wheat RLK genes in response to biotic and abiotic stresses.

Jun Yan, Peisen Su, Xianyong Meng, Pingzeng Liu

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
16.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 79 citations in OpenAlex.

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  7. Transcriptional Response of Durum Wheat During Interaction withInternational journal of molecular sciences · 2026
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  19. Special Issue "Molecular Genetics and Plant Breeding 3.0 and 4.0".International journal of molecular sciences · 2025
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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Jun Yan *Key Laboratory of Huang-Huai-Hai Smart Agricultural Technology of the Ministry of Agriculture and Rural Affairs, College of Information Science and Engineering, Shandong Agricultural University, Tai'an, Shandong, 271018, People's Republic of China. xinsinian2006@163.com.
Peisen Su *College of Agronomy, Liaocheng University, Liaocheng, 252059, People's Republic of China. pssu2014@163.com.
Xianyong MengKey Laboratory of Huang-Huai-Hai Smart Agricultural Technology of the Ministry of Agriculture and Rural Affairs, College of Information Science and Engineering, Shandong Agricultural University, Tai'an, Shandong, 271018, People's Republic of China.
Pingzeng LiuKey Laboratory of Huang-Huai-Hai Smart Agricultural Technology of the Ministry of Agriculture and Rural Affairs, College of Information Science and Engineering, Shandong Agricultural University, Tai'an, Shandong, 271018, People's Republic of China. pzliu@sdau.edu.cn.
Shandong Agricultural University · CNLiaocheng University · CNMinistry of Agriculture and Rural Affairs · CN

Funding

A Project of Shandong Province Higher Educational Science and Technology Program J18KA117Doctoral research start-up funds from Liaocheng University 318052018Natural Science Foundation of Shandong Province ZR2022QC129Open project of State Key Laboratory of Crop Biology in Shandong Agricultural University 2021KF03the Science and Technology Development Plan of Tai 'an in 2019 (guidance plan) 2019NS080
6 · The paper itself

Abstract

backgroundThe receptor-like kinase (RLK) gene families in plants contains a large number of members. They are membrane proteins with an extracellular receptor domain and participate in biotic and abiotic stress responses.

resultsIn this study, we identified RLKs in 15 representative plant genomes, including wheat, and classified them into 64 subfamilies by using four types of phylogenetic trees and HMM models. Conserved exon‒intron structures with conserved exon phases in the kinase domain were found in many RLK subfamilies from Physcomitrella patens to Triticum aestivum. Domain distributions of RLKs were also diagrammed. Collinearity events and tandem gene clusters suggested that polyploidization and tandem duplication events contributed to the member expansions of T. aestivum RLKs. Global expression pattern analysis was performed by using public transcriptome data. These analyses were involved in T. aestivum, Aegilops tauschii and Brachypodium distachyon RLKs under biotic and abiotic stresses. We also selected 9 RLKs to validate the transcriptome prediction by using qRT‒PCR under drought treatment and with Fusarium graminearum infection. The expression trends of these 9 wheat RLKs from public transcriptome data were consistent with the results of qRT‒PCR, indicating that they might be stress response genes under drought or F. graminearum treatments.

conclusionIn this study, we identified, classified, evolved, and expressed RLKs in wheat and related plants. Thus, our results will provide insights into the evolutionary history and molecular mechanisms of wheat RLKs.

Indexed as

Plant ProteinsTriticumGene Expression Regulation, PlantGenes, PlantGenome, PlantMultigene FamilyPhylogenyPlantsProtein-Tyrosine KinasesStress, PhysiologicalPlant ProteinsProtein-Tyrosine KinasesBiotic and abiotic stressesCollinearity eventsConserved exon–intron structuresEvolutionExpression patterns in wheatReceptor-like kinase gene family

Identifiers

PMID37127571
PMCPMC10152718
OpenAlexW4367625056

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.