Evidence map›Paper›PMID 37124419›Full record

ArticleiScience2023

Multiplexed on-yeast serological assay for immune escape screening of SARS-CoV-2 variants.

Joanan Lopez-Morales, Rosario Vanella, Tamara Utzinger, Valentin Schittny, Julia Hirsiger, Michael Osthoff, Christoph T Berger, Yakir Guri, Michael A Nash

Abstract read
In one paragraph

Article in iScience, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Review
  3. Backstage Heroes-Yeast in COVID-19 Research.International journal of molecular sciences · 2024
    Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Joanan Lopez-MoralesInstitute of Physical Chemistry, Department of Chemistry, University of Basel, Basel 4058, Switzerland.
Rosario VanellaInstitute of Physical Chemistry, Department of Chemistry, University of Basel, Basel 4058, Switzerland.
Tamara UtzingerInstitute of Physical Chemistry, Department of Chemistry, University of Basel, Basel 4058, Switzerland.
Valentin SchittnyDepartment of Biosystems Science and Engineering, ETH Zurich, 4058 Basel, Switzerland.
Julia HirsigerDepartment of Biomedicine, University of Basel, 4056 Basel, Switzerland.
Michael OsthoffBotnar Research Centre for Child Health (BRCCH), 4051 Basel, Switzerland.
Christoph T BergerBotnar Research Centre for Child Health (BRCCH), 4051 Basel, Switzerland.
Yakir GuriBotnar Research Centre for Child Health (BRCCH), 4051 Basel, Switzerland.
Michael A NashInstitute of Physical Chemistry, Department of Chemistry, University of Basel, Basel 4058, Switzerland.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The emergence of the SARS-CoV-2 Omicron variant altered patient risk profiles and shifted the trajectory of the COVID-19 pandemic. Therefore, sensitive serological tests capable of analyzing patient IgG responses to multiple variants in parallel are highly desirable. Here, we present an adaptable serological test based on yeast surface display and serum biopanning that characterizes immune profiles against SARS-CoV-2 Wuhan (B lineage), Delta (B.1.617.2 lineage), and Omicron (B.1.1.529 lineage) receptor-binding domain (RBD) variants. We examined IgG titers from 30 serum samples from COVID-19-convalescent and vaccinated cohorts in Switzerland, and assessed the relative affinity of polyclonal serum IgG for RBD domains. We demonstrate that serum IgGs from patients recovered from severe COVID-19 between March-June 2021 bound tightly to both original Wuhan and Delta RBD variants, but failed to recognize Omicron RBDs, representing an affinity loss of >10- to 20-fold. Our yeast immunoassay is easily tailored, expandable and parallelized with newly emerging RBD variants.

Indexed as

DiagnosticsHealth sciencesImmunologyVirology

Identifiers

PMID37124419
PMCPMC10089669

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.