Evidence map›Paper›PMID 37120556›Full record

ArticleProteome science2023

Proteomics identifies differentially expressed proteins in glioblastoma U87 cells treated with hederagenin.

Yesen Zhang, Yi Han, Yuchun Shang, Xiangyu Wang, Jiwei Sun

Open access · goldAbstract read
In one paragraph

Article in Proteome science, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
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  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Yesen Zhang *Department of Neurosurgery, The First Affiliated Hospital of Bengbu Medical College, Bengbu, 233004, China.
Yi Han *Department of Neurosurgery, The First Affiliated Hospital of Bengbu Medical College, Bengbu, 233004, China.
Yuchun ShangDepartment of Neurosurgery, The First Affiliated Hospital of Bengbu Medical College, Bengbu, 233004, China.
Xiangyu WangDepartment of Neurosurgery, The First Affiliated Hospital of Jinan University, Guangzhou, 510630, Guangdong, China. wang_xy123@126.com.
Jiwei SunDepartment of Neurosurgery, The First Affiliated Hospital of Bengbu Medical College, Bengbu, 233004, China. sunjiwyx@163.com.
First Affiliated Hospital of Bengbu Medical College · CNFirst Affiliated Hospital of Jinan University · CN

Funding

Key Project of Natural Science of Bengbu Medical College 2021byzd079
6 · The paper itself

Abstract

objectiveWe investigated differentially expressed proteins (DEPs) in human glioblastoma U87 cells after treatment with hederagenin as a therapeutic screening mechanism and provided a theoretical basis for hederagenin in treating glioblastoma.

methodsThe Cell Counting Kit 8 assay was used to analyze the inhibitory effect of hederagenin on the proliferation of U87 cells. Protein was identified by tandem mass tags and LC-MS/MS analysis techniques. Annotation of DEPs, Gene Ontology enrichment and function, and Kyoto Encyclopedia of Genes and Genomes pathways and domains were all examined by bioinformatics. According to the TMT results, hub protein was selected from DEPs for WB verification.

resultsProtein quantitative analysis found 6522 proteins in total. Compared with the control group, 43 DEPs (P < 0.05) were involved in the highly enriched signaling pathway in the hederagenin group, among which 20 proteins were upregulated, and 23 proteins were downregulated. These different proteins are mainly involved in the longness regulating pathway-WORM, the hedgehog signaling pathway, Staphylococcus aureus infection, complement, coagulation cascades, and mineral absorption. KIF7 and ATAD2B expression were significantly down-regulated and PHEX and TIMM9 expression were significantly upregulated, according to WB analysis, supporting the TMT findings.

conclusionHederagenin inhibition of GBM U87 cells may be related to KIF7, which is mainly involved in the hedgehog signaling pathway. Our findings lay a foundation for additional study of the therapeutic mechanism of hederagenin.

Indexed as

GlioblastomaHederageninKIF7ProteomicsTandem mass tags

Identifiers

PMID37120556
PMCPMC10148390
OpenAlexW4367393803

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.