Evidence map›Paper›PMID 37118559›Full record

ArticlePlant molecular biology2023

Completing the TRB family: newly characterized members show ancient evolutionary origins and distinct localization, yet similar interactions.

Alžbeta Kusová, Lenka Steinbachová, Tereza Přerovská, Lenka Záveská Drábková, Jan Paleček, Ahamed Khan, Gabriela Rigóová, Zuzana Gadiou, Claire Jourdain, Tino Stricker and 3 more

Abstract read
In one paragraph

Article in Plant molecular biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. The leaves fall, yet the tree endures.Cellular and molecular life sciences : CMLS · 2025
    Review
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Cytokinins - regulators ofFrontiers in plant science · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Alžbeta Kusová *Laboratory of Functional Genomics and Proteomics, Faculty of Science, National Centre for Biomolecular Research, Masaryk University, Brno, Czech Republic.ORCID http://orcid.org/0000-0002-5474-1926
Lenka Steinbachová *Laboratory of Pollen Biology, Institute of Experimental Botany of the Czech Academy of Sciences, Prague, Czech Republic.ORCID http://orcid.org/0000-0001-8347-5770
Tereza PřerovskáLaboratory of Functional Genomics and Proteomics, Faculty of Science, National Centre for Biomolecular Research, Masaryk University, Brno, Czech Republic.ORCID http://orcid.org/0000-0002-2918-9383
Lenka Záveská DrábkováLaboratory of Pollen Biology, Institute of Experimental Botany of the Czech Academy of Sciences, Prague, Czech Republic.ORCID http://orcid.org/0000-0003-1140-6607
Jan PalečekLaboratory of Functional Genomics and Proteomics, Faculty of Science, National Centre for Biomolecular Research, Masaryk University, Brno, Czech Republic.ORCID http://orcid.org/0000-0002-6223-5169
Ahamed KhanInstitute of Plant Molecular Biology, Biology Centre of the Czech Academy of Sciences, České Budějovice, Czech Republic.ORCID http://orcid.org/0000-0003-4616-0694
Gabriela RigóováLaboratory of Functional Genomics and Proteomics, Faculty of Science, National Centre for Biomolecular Research, Masaryk University, Brno, Czech Republic.ORCID http://orcid.org/0000-0003-2491-8513
Zuzana GadiouLaboratory of Pollen Biology, Institute of Experimental Botany of the Czech Academy of Sciences, Prague, Czech Republic.ORCID http://orcid.org/0000-0003-1731-3305
Claire JourdainInstitute of Biology, Freie Universität Berlin, 14195, Berlin, Germany.ORCID http://orcid.org/0000-0002-3568-580X
Tino StrickerInstitute of Biology, Freie Universität Berlin, 14195, Berlin, Germany.ORCID http://orcid.org/0000-0002-5751-2547
Daniel SchubertInstitute of Biology, Freie Universität Berlin, 14195, Berlin, Germany.ORCID http://orcid.org/0000-0003-2390-0733
David HonysLaboratory of Pollen Biology, Institute of Experimental Botany of the Czech Academy of Sciences, Prague, Czech Republic.ORCID http://orcid.org/0000-0002-6848-4887
Petra Procházková SchrumpfováLaboratory of Functional Genomics and Proteomics, Faculty of Science, National Centre for Biomolecular Research, Masaryk University, Brno, Czech Republic. schpetra@sci.muni.cz.ORCID http://orcid.org/0000-0003-0066-1581

Funding

Grantová Agentura České Republiky 20-01331XGrantová Agentura České Republiky 21-15841SMinisterstvo Školství, Mládeže a Tělovýchovy LTAUSA18115
6 · The paper itself

Abstract

Telomere repeat binding proteins (TRBs) belong to a family of proteins possessing a Myb-like domain which binds to telomeric repeats. Three members of this family (TRB1, TRB2, TRB3) from Arabidopsis thaliana have already been described as associated with terminal telomeric repeats (telomeres) or short interstitial telomeric repeats in gene promoters (telo-boxes). They are also known to interact with several protein complexes: telomerase, Polycomb repressive complex 2 (PRC2) E(z) subunits and the PEAT complex (PWOs-EPCRs-ARIDs-TRBs). Here we characterize two novel members of the TRB family (TRB4 and TRB5). Our wide phylogenetic analyses have shown that TRB proteins evolved in the plant kingdom after the transition to a terrestrial habitat in Streptophyta, and consequently TRBs diversified in seed plants. TRB4-5 share common TRB motifs while differing in several others and seem to have an earlier phylogenetic origin than TRB1-3. Their common Myb-like domains bind long arrays of telomeric repeats in vitro, and we have determined the minimal recognition motif of all TRBs as one telo-box. Our data indicate that despite the distinct localization patterns of TRB1-3 and TRB4-5 in situ, all members of TRB family mutually interact and also bind to telomerase/PRC2/PEAT complexes. Additionally, we have detected novel interactions between TRB4-5 and EMF2 and VRN2, which are Su(z)12 subunits of PRC2.

Indexed as

ArabidopsisArabidopsis ProteinsTelomerasePhylogenySoilTelomereTelomere-Binding ProteinsArabidopsis ProteinsSoilTelomeraseTelomere-Binding ProteinsPEATPRC2Telomere repeat bindingTelomericTERTTRB

Identifiers

PMID37118559
PMCPMC10167121

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.