Evidence map›Paper›PMID 37117831›Full record

ArticleNature aging2021

Quantitative phosphoproteomics uncovers dysregulated kinase networks in Alzheimer's disease.

Nader Morshed, Meelim J Lee, Felicia H Rodriguez, Douglas A Lauffenburger, Diego Mastroeni, Forest M White

Abstract read
PubMed Publisher
In one paragraph

Article in Nature aging, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed.

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  10. Unraveling sex differences in Alzheimer's disease and related endophenotypes with brain proteomes.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2025
    Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

Nader MorshedDepartment of Bioengineering, Massachusetts Institute of Technology, Cambridge, MA, USA.ORCID 0000-0002-0346-9651
Meelim J LeeDepartment of Bioengineering, Massachusetts Institute of Technology, Cambridge, MA, USA.ORCID 0000-0002-5657-4949
Felicia H RodriguezDepartment of Chemical and Materials Engineering, New Mexico State University, Las Cruces, NM, USA.ORCID 0000-0002-3136-8831
Douglas A LauffenburgerDepartment of Bioengineering, Massachusetts Institute of Technology, Cambridge, MA, USA.ORCID 0000-0002-0050-989X
Diego MastroeniArizona State University-Banner Neurodegenerative Disease Research Center, Tempe, AZ, USA.ORCID 0000-0001-5878-9372
Forest M WhiteDepartment of Bioengineering, Massachusetts Institute of Technology, Cambridge, MA, USA. fwhite@mit.edu.ORCID 0000-0002-1545-1651

Funding

Research Education ComponentP30AG019610 · NIA · SUN HEALTH RESEARCH INSTITUTE · PI GONZALEZ HERNANDEZ, GRACIELA · 2001 to 2020
$32.5M
Interdepartmental Biotechnology Training ProgramT32GM008334 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI WITTRUP, KARL DANE · 1989 to 2018
$15.2M
National Brain and Tissue Resource for Parkinson's Disease and Related DisordersU24NS072026 · NINDS · BANNER SUN HEALTH RESEARCH INSTITUTE · PI BEACH, THOMAS G · 2011 to 2015
$7.8M
NIA NIH HHS P30 AG019610NIGMS NIH HHS T32 GM008334NINDS NIH HHS U24 NS072026
6 · The paper itself

Abstract

Alzheimer's disease (AD) is a form of dementia characterized by amyloid-β plaques and tau neurofibrillary tangles that progressively disrupt neural circuits in the brain. The signaling networks underlying AD pathological changes are poorly characterized at the phosphoproteome level. Using mass spectrometry, we analyzed the proteome and tyrosine, serine and threonine phosphoproteomes of temporal cortex tissue from patients with AD and aged-matched controls. We identified cocorrelated peptide clusters that were linked to varying levels of phospho-tau, oligodendrocyte, astrocyte, microglia and neuron pathologies. We found that neuronal synaptic protein abundances were strongly anti-correlated with markers of microglial reactivity. We also observed that phosphorylation sites on kinases targeting tau and other new signaling factors were correlated with these peptide modules. Finally, we used data-driven statistical modeling to identify individual peptides and peptide clusters that were predictive of AD histopathologies. Together, these results build a map of pathology-associated phosphorylation signaling events occurring in AD.

Indexed as

Alzheimer DiseaseAmyloid beta-PeptidesHumansNeurofibrillary TanglesNeuronsPlaque, Amyloidtau ProteinsAmyloid beta-Peptidestau Proteins

Identifiers

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.