Evidence map›Paper›PMID 37113226›Full record

ArticleFrontiers in microbiology2023

Prediction models for neutralization activity against emerging SARS-CoV-2 variants: A cross-sectional study.

Atsushi Goto, Kei Miyakawa, Izumi Nakayama, Susumu Yagome, Juan Xu, Makoto Kaneko, Norihisa Ohtake, Hideaki Kato, Akihide Ryo

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Atsushi Goto *Department of Public Health, School of Medicine, Yokohama City University, Yokohama, Japan.
Kei Miyakawa *Department of Microbiology, Graduate School of Medicine, Yokohama City University, Yokohama, Japan.
Izumi NakayamaDepartment of Public Health, School of Medicine, Yokohama City University, Yokohama, Japan.
Susumu YagomeDepartment of Health Data Science, Graduate School of Data Science, Yokohama City University, Yokohama, Japan.
Juan XuDepartment of Endocrinology and Metabolism, Graduate School of Medicine, Yokohama City University, Yokohama, Japan.
Makoto KanekoDepartment of Health Data Science, Graduate School of Data Science, Yokohama City University, Yokohama, Japan.
Norihisa OhtakeBioscience Division, Research and Development Department, Tosoh Corporation, Tokyo Research Center, Ayase, Japan.
Hideaki KatoInfection Prevention and Control Department, Yokohama City University Hospital, Yokohama, Japan.
Akihide RyoDepartment of Microbiology, Graduate School of Medicine, Yokohama City University, Yokohama, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Objective: Despite extensive vaccination campaigns to combat the coronavirus disease (COVID-19) pandemic, variants of concern, particularly the Omicron variant (B.1.1.529 or BA.1), may escape the antibodies elicited by vaccination against SARS-CoV-2. Therefore, this study aimed to evaluate 50% neutralizing activity (NT Methods: We used a random 10% of samples from 1,277 participants in a population-based cross-sectional survey conducted in January and February 2022 in Yokohama City, the most populous municipality in Japan. We measured NT Results: Among 123 participants aged 20-74, 93% had received two doses of SARS-CoV-2 vaccine. The geometric means (95% confidence intervals) of NT Conclusion: In a general Japanese population with 93% of the population vaccinated with two doses of SARS-CoV-2 vaccine, neutralizing activity against Omicron BA.1 and BA.2 were substantially lower than those against D614G or the Delta variant. The prediction models for Omicron BA.1 and BA.2 showed moderate predictive ability and the model for BA.1 performed well in validation data.

Indexed as

COVID-19neutralizing antibodyOmicron sub-lineageprediction modelSARS-CoV-2

Identifiers

PMID37113226
PMCPMC10126441

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.