Evidence map›Paper›PMID 37112971›Full record

ArticleViruses2023

HIV-1 Drug Resistance among Treatment-Naïve Patients in Russia: Analysis of the National Database, 2006-2022.

Alina Kirichenko, Dmitry Kireev, Ilya Lapovok, Anastasia Shlykova, Alexey Lopatukhin, Anastasia Pokrovskaya, Marina Bobkova, Anastasiia Antonova, Anna Kuznetsova, Ekaterina Ozhmegova and 16 more

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors at 10 institutions in 1 country.

Alina KirichenkoCentral Research Institute of Epidemiology, 111123 Moscow, Russia.ORCID 0000-0002-7116-0138
Dmitry KireevCentral Research Institute of Epidemiology, 111123 Moscow, Russia.ORCID 0000-0002-7896-2379
Ilya LapovokCentral Research Institute of Epidemiology, 111123 Moscow, Russia.ORCID 0000-0002-6328-1415
Anastasia ShlykovaCentral Research Institute of Epidemiology, 111123 Moscow, Russia.ORCID 0000-0002-1390-8021
Alexey LopatukhinCentral Research Institute of Epidemiology, 111123 Moscow, Russia.ORCID 0000-0002-2826-699X
Anastasia PokrovskayaCentral Research Institute of Epidemiology, 111123 Moscow, Russia.ORCID 0000-0002-2677-0404
Marina BobkovaGamaleya National Research Center for Epidemiology and Microbiology, 123098 Moscow, Russia.ORCID 0000-0001-5481-8957
Anastasiia AntonovaGamaleya National Research Center for Epidemiology and Microbiology, 123098 Moscow, Russia.
Anna KuznetsovaGamaleya National Research Center for Epidemiology and Microbiology, 123098 Moscow, Russia.ORCID 0000-0001-5299-3081
Ekaterina OzhmegovaGamaleya National Research Center for Epidemiology and Microbiology, 123098 Moscow, Russia.ORCID 0000-0002-3110-0843
Sergey ShtrekOmsk Research Institute of Natural Focal Infections, 644080 Omsk, Russia.
Aleksej SannikovOmsk Research Institute of Natural Focal Infections, 644080 Omsk, Russia.
Natalia ZaytsevaAcademician I.N. Blokhina Nizhny Novgorod Scientific Research Institute of Epidemiology and Microbiology of the Rospotrebnadzor, 603022 Nizhny Novgorod, Russia.
Olga PekshevaAcademician I.N. Blokhina Nizhny Novgorod Scientific Research Institute of Epidemiology and Microbiology of the Rospotrebnadzor, 603022 Nizhny Novgorod, Russia.
Michael PiterskiyFederal Scientific Research Institute of Viral Infections «Virome» Federal Service for Surveillance on Consumer Rights Protection and Human Wellbeing, 620030 Ekaterinburg, Russia.ORCID 0000-0001-5506-2389
Aleksandr SemenovFederal Scientific Research Institute of Viral Infections «Virome» Federal Service for Surveillance on Consumer Rights Protection and Human Wellbeing, 620030 Ekaterinburg, Russia.
Galina TurbinaLipetsk Regional Center for Prevention and Control of AIDS and Infectious Diseases, 398043 Lipetsk, Russia.
Natalia FiloniukLipetsk Regional Center for Prevention and Control of AIDS and Infectious Diseases, 398043 Lipetsk, Russia.
Andrey ShemshuraClinical Center of HIV/AIDS Treatment and Prevention of the Ministry of Health of Krasnodar Region, 350000 Krasnodar, Russia.ORCID 0000-0003-1637-4229
Valeriy KulaginClinical Center of HIV/AIDS Treatment and Prevention of the Ministry of Health of Krasnodar Region, 350000 Krasnodar, Russia.
Dmitry KolpakovRostov Research Institute of Microbiology and Parasitology, 344000 Rostov-on-Don, Russia.
Aleksandr SuladzeRostov Research Institute of Microbiology and Parasitology, 344000 Rostov-on-Don, Russia.
Valeriya KotovaKhabarovsk Research Institute of Epidemiology and Microbiology of the Rospotrebnadzor, 680610 Khabarovsk, Russia.
Lyudmila BalakhontsevaKhabarovsk Research Institute of Epidemiology and Microbiology of the Rospotrebnadzor, 680610 Khabarovsk, Russia.
Vadim PokrovskyCentral Research Institute of Epidemiology, 111123 Moscow, Russia.
Vasiliy AkimkinCentral Research Institute of Epidemiology, 111123 Moscow, Russia.
Central Research Institute of Epidemiology · RUGamalei Institute of Epidemiology and Microbiology · RUFederal Service for Surveillance on Consumer Rights Protection and Human Wellbeing · RUKhabarovsk Scientific Research Institute of Epidemiology and Microbiology · RUKuban State Medical University · RUNizhniy Novgorod Research Institute of Epidemiology and Microbiology named after Academician I.N. Blokhina · RUOmsk State Medical University · RURegional Center for Prevention and Control of AIDS and Infectious Diseases · RURostov Research Institute of Microbiology and Parasitology · RUPeoples' Friendship University of Russia · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In Russia, antiretroviral therapy (ART) coverage has significantly increased, which, in the absence of routine genotyping testing, could lead to an increase in HIV drug resistance (DR). The aim of this study was to investigate the patterns and temporal trends in HIV DR as well as the prevalence of genetic variants in treatment-naïve patients from 2006 to 2022, using data from the Russian database (4481 protease and reverse transcriptase and 844 integrase gene sequences). HIV genetic variants, and DR and DR mutations (DRMs) were determined using the Stanford Database. The analysis showed high viral diversity, with the predominance of A6 (78.4%), which was the most common in all transmission risk groups. The overall prevalence of surveillance DRMs (SDRMs) was 5.4%, and it reached 10.0% in 2022. Most patients harbored NNRTI SDRMs (3.3%). The prevalence of SDRMs was highest in the Ural (7.9%). Male gender and the CRF63_02A6 variant were association factors with SDRMs. The overall prevalence of DR was 12.7% and increased over time, primarily due to NNRTIs. Because baseline HIV genotyping is unavailable in Russia, it is necessary to conduct surveillance of HIV DR due to the increased ART coverage and DR prevalence. Centralized collection and unified analysis of all received genotypes in the national database can help in understanding the patterns and trends in DR to improve treatment protocols and increase the effectiveness of ART. Moreover, using the national database can help identify regions or transmission risk groups with a high prevalence of HIV DR for epidemiological measures to prevent the spread of HIV DR in the country.

Indexed as

Anti-HIV AgentsHIV-1HIV InfectionsHIV SeropositivityDrug Resistance, ViralGenotypeHumansMaleMutationPrevalenceRussiaAnti-HIV Agentsdatabasedrug resistanceHIV-1Russiatreatment-naïve

Identifiers

PMID37112971
PMCPMC10141655
OpenAlexW4366347117

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.