Evidence map›Paper›PMID 37112914›Full record

ArticleViruses2023

Whole-Genome Characterization of SARS-CoV-2 Reveals Simultaneous Circulation of Three Variants and a Putative Recombination (20B/20H) in Pets, Brazzaville, Republic of the Congo.

Léadisaelle Hosanna Lenguiya, Matthieu Fritz, Daphné de Riols De Fonclare, Sandrine Corbet, Pierre Becquart, Christophe Mbou, Ruben Junias Nguie, Wivine Salva Mouellet, Jordy Exaucé Lyelet Demboux, N'kaya-Tobi and 5 more

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 2 countries.

Léadisaelle Hosanna LenguiyaFaculté des Sciences et Techniques, Université Marien Ngouabi, Brazzaville BP69, Congo.ORCID 0009-0004-1617-5689
Matthieu FritzInstitut de Recherche pour le Développement, Unité Mixte de Recherche Mivegec, BP34090 Montpellier, France.ORCID 0000-0003-4112-3755
Daphné de Riols De FonclareUNICAEN, Department of Viroloy, University of Rouen Normandie, Inserm Dynamicure UMR 1311, BP14000 Caen, France.ORCID 0000-0001-5343-8928
Sandrine CorbetUNICAEN, Department of Viroloy, University of Rouen Normandie, Inserm Dynamicure UMR 1311, BP14000 Caen, France.
Pierre BecquartInstitut de Recherche pour le Développement, Unité Mixte de Recherche Mivegec, BP34090 Montpellier, France.ORCID 0000-0002-0980-1678
Christophe MbouDirection Générale de l'Elevage, Brazzaville BP2354, Congo.
Ruben Junias NguieDirection Générale de l'Elevage, Brazzaville BP2354, Congo.
Wivine Salva MouelletLaboratoire National de Santé Publique, Brazzaville BP120, Congo.
Jordy Exaucé Lyelet DembouxFaculté des Sciences et Techniques, Université Marien Ngouabi, Brazzaville BP69, Congo.
N'kaya-TobiDirection Générale de l'Elevage, Brazzaville BP2354, Congo.
Pembe Issamou MayengueFaculté des Sciences et Techniques, Université Marien Ngouabi, Brazzaville BP69, Congo.
Félix Koukouikila-KoussoundaFaculté des Sciences et Techniques, Université Marien Ngouabi, Brazzaville BP69, Congo.
Meriadeg Ar GouilhUNICAEN, Department of Viroloy, University of Rouen Normandie, Inserm Dynamicure UMR 1311, BP14000 Caen, France.ORCID 0000-0002-3672-9974
Eric M LeroyInstitut de Recherche pour le Développement, Unité Mixte de Recherche Mivegec, BP34090 Montpellier, France.ORCID 0000-0003-0022-0890
Fabien Roch NiamaFaculté des Sciences et Techniques, Université Marien Ngouabi, Brazzaville BP69, Congo.ORCID 0000-0003-3843-9396
Laboratoire National de Santé Publique du Congo · CGInserm · FRMaladies Infectieuses et Vecteurs: Écologie, Génétique, Évolution et Contrôle · FRMarien Ngouabi University · CG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Following the emergence of SARS-CoV-2, cases of pets infected with variants circulating among humans were reported. In order to evaluate the occurrence of SARS-CoV-2 circulation among pets in the Republic of the Congo, we conducted a ten-month study of dogs and cats living in COVID-19-positive households in Brazzaville and neighboring localities. Real-time PCR and the Luminex platform were used to detect SARS-CoV-2 RNA and antibodies to SARS-CoV-2 RBD and S proteins, respectively. Our results show for the first time the simultaneous circulation of several variants of SARS-CoV-2, including viruses from clades 20A and 20H and a putative recombinant variant between viruses from clades 20B and 20H. We found a high seroprevalence of 38.6%, with 14% of tested pets positive for SARS-CoV-2 RNA. Thirty-four percent of infected pets developed mild clinical signs, including respiratory and digestive signs, and shed the virus for about one day to two weeks. These results highlight the potential risk of SARS-CoV-2 interspecies transmission and the benefits of a "One Health" approach that includes SARS-CoV-2 diagnosis and surveillance of viral diversity in pets. This approach aims to prevent transmission to surrounding wildlife as well as spillback to humans.

Indexed as

Cat DiseasesCOVID-19Dog DiseasesAnimalsCatsCongoCOVID-19 TestingDogsHumansRecombination, GeneticRNA, ViralSARS-CoV-2Seroepidemiologic StudiesRNA, ViralcatsdogsNGSpetsRepublic of the Congo (RoC)RT-qPCRSARS-CoV-2serology

Identifiers

PMID37112914
PMCPMC10142050
OpenAlexW4363675393

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.