Evidence map›Paper›PMID 37110166›Full record

ArticleMetabolites2023

Metabolically Active Zones Involving Fatty Acid Elongation Delineated by DESI-MSI Correlate with Pathological and Prognostic Features of Colorectal Cancer.

Martin Kaufmann, Natasha Iaboni, Amoon Jamzad, David Hurlbut, Kevin Yi Mi Ren, John F Rudan, Parvin Mousavi, Gabor Fichtinger, Sonal Varma, Antonio Caycedo-Marulanda and 1 more

Open access · goldAbstract read
In one paragraph

Article in Metabolites, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Martin KaufmannDepartment of Surgery, Kingston Health Sciences Centre, Kingston, ON K7L 2V7, Canada.
Natasha IaboniDepartment of Pathology and Molecular Medicine, Queen's University and Kingston Health Sciences Centre, Kingston, ON K7L 3N6, Canada.
Amoon JamzadSchool of Computing, Queen's University, Kingston, ON K7L 2N8, Canada.
David HurlbutDepartment of Pathology and Molecular Medicine, Queen's University and Kingston Health Sciences Centre, Kingston, ON K7L 3N6, Canada.ORCID 0000-0002-8751-9539
Kevin Yi Mi RenDepartment of Pathology and Molecular Medicine, Queen's University and Kingston Health Sciences Centre, Kingston, ON K7L 3N6, Canada.
John F RudanDepartment of Surgery, Kingston Health Sciences Centre, Kingston, ON K7L 2V7, Canada.
Parvin MousaviSchool of Computing, Queen's University, Kingston, ON K7L 2N8, Canada.
Gabor FichtingerSchool of Computing, Queen's University, Kingston, ON K7L 2N8, Canada.ORCID 0000-0002-6354-262X
Sonal VarmaDepartment of Pathology and Molecular Medicine, Queen's University and Kingston Health Sciences Centre, Kingston, ON K7L 3N6, Canada.
Antonio Caycedo-MarulandaDepartment of Surgery, Kingston Health Sciences Centre, Kingston, ON K7L 2V7, Canada.ORCID 0000-0003-2387-5304
Christopher J B NicolDepartment of Pathology and Molecular Medicine, Queen's University and Kingston Health Sciences Centre, Kingston, ON K7L 3N6, Canada.
Queen's University · CAKingston Health Sciences Centre · CAOrlando Health · US

Funding

Canada Foundation for Innovation John R Evans fundCanada Research Chairs Computer-Integrated SurgeryQueen's University Bridge FundingQueen's University Chair in Surgical InnovationQueen's University Department of Surgery Britton Smith Chair
6 · The paper itself

Abstract

Colorectal cancer (CRC) is the second leading cause of cancer deaths. Despite recent advances, five-year survival rates remain largely unchanged. Desorption electrospray ionization mass spectrometry imaging (DESI) is an emerging nondestructive metabolomics-based method that retains the spatial orientation of small-molecule profiles on tissue sections, which may be validated by 'gold standard' histopathology. In this study, CRC samples were analyzed by DESI from 10 patients undergoing surgery at Kingston Health Sciences Center. The spatial correlation of the mass spectral profiles was compared with histopathological annotations and prognostic biomarkers. Fresh frozen sections of representative colorectal cross sections and simulated endoscopic biopsy samples containing tumour and non-neoplastic mucosa for each patient were generated and analyzed by DESI in a blinded fashion. Sections were then hematoxylin and eosin (H and E) stained, annotated by two independent pathologists, and analyzed. Using PCA/LDA-based models, DESI profiles of the cross sections and biopsies achieved 97% and 75% accuracies in identifying the presence of adenocarcinoma, using leave-one-patient-out cross validation. Among the m/z ratios exhibiting the greatest differential abundance in adenocarcinoma were a series of eight long-chain or very-long-chain fatty acids, consistent with molecular and targeted metabolomics indicators of de novo lipogenesis in CRC tissue. Sample stratification based on the presence of lympovascular invasion (LVI), a poor CRC prognostic indicator, revealed the abundance of oxidized phospholipids, suggestive of pro-apoptotic mechanisms, was increased in LVI-negative compared to LVI-positive patients. This study provides evidence of the potential clinical utility of spatially-resolved DESI profiles to enhance the information available to clinicians for CRC diagnosis and prognosis.

Indexed as

biopsycolorectal cancerdesorption electrospray ionization mass spectrometry imaginghistopathologylong chain fatty acidslymphovascular invasionprognostic markers

Identifiers

PMID37110166
PMCPMC10141897
OpenAlexW4362475099

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.