Evidence map›Paper›PMID 37109511›Full record

ArticleLife (Basel, Switzerland)2023

Phosphorylation of Tyrosine 841 Plays a Significant Role in JAK3 Activation.

Shengjie Sun, Georgialina Rodriguez, Yixin Xie, Wenhan Guo, Alan E Lopez Hernandez, Jason E Sanchez, Robert Arthur Kirken, Lin Li

Open access · goldAbstract read
In one paragraph

Article in Life (Basel, Switzerland), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.8field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Shengjie SunComputational Science Program, The University of Texas at El Paso, 500 W University Ave., El Paso, TX 79968, USA.
Georgialina RodriguezDepartment of Biological Sciences, The University of Texas at El Paso, 500 W University Ave., El Paso, TX 79968, USA.
Yixin XieComputational Science Program, The University of Texas at El Paso, 500 W University Ave., El Paso, TX 79968, USA.ORCID 0000-0002-4436-3474
Wenhan GuoComputational Science Program, The University of Texas at El Paso, 500 W University Ave., El Paso, TX 79968, USA.ORCID 0000-0002-6767-075X
Alan E Lopez HernandezComputational Science Program, The University of Texas at El Paso, 500 W University Ave., El Paso, TX 79968, USA.
Jason E SanchezComputational Science Program, The University of Texas at El Paso, 500 W University Ave., El Paso, TX 79968, USA.
Robert Arthur KirkenDepartment of Biological Sciences, The University of Texas at El Paso, 500 W University Ave., El Paso, TX 79968, USA.
Lin LiComputational Science Program, The University of Texas at El Paso, 500 W University Ave., El Paso, TX 79968, USA.ORCID 0000-0001-6447-2398
The University of Texas at El Paso · US

Funding

UTEP Border Biomedical Research CenterU54MD007592 · NIMHD · UNIVERSITY OF TEXAS EL PASO · PI Gabriel Andrew Frietze · 2019 to 2026
$35.1M
Developing and applying large-scale simulation approach to understand the mechanisms of kinesins' motilities along microtubulesSC1GM132043 · NIGMS · UNIVERSITY OF TEXAS EL PASO · PI LI, LIN · 2019 to 2022
$1.5M
NIGMS NIH HHS SC1 GM132043NIMHD NIH HHS No. 5U54MD007592NIMHD NIH HHS U54 MD007592
6 · The paper itself

Abstract

Janus Kinase 3 (JAK3) plays a key role in the development, proliferation, and differentiation of various immune cells. It regulates gene expression by phosphorylation of Signal Transducers and Activators of Transcriptions (STATs) via the JAK/STAT pathway. Recently, we found a new JAK3 phosphorylation site, tyrosine 841 (Y841). The results showed that pY841 helps the kinase domain flip around the pseudo kinase domain, which may cause JAK3 conformational changes. It also reduces the size of the cleft between the N-lobe and the C-lobe of the JAK3 kinase domain. However, pY841 was found to enlarge the cleft when ATP/ADP was bound to the kinase. The increase in the cleft size suggested that pY841 enhanced the elasticity of the kinase domain. For unphosphorylated JAK3 (JAK3-Y841), the binding forces between the kinase domain and ATP or ADP were similar. After phosphorylation of Y841, JAK3-pY841 exhibited more salt bridges and hydrogen bonds between ATP and the kinase than between ADP and the kinase. Consequently, the electrostatic binding force between ATP and the kinase was higher than that between ADP and the kinase. The result was that compared to ADP, ATP was more attractive to JAK3 when Y841 was phosphorylated. Therefore, JAK3-pY841 tended to bind ATP rather than ADP. This work provides new insights into the role of phosphorylation in kinase activation and ATP hydrolysis and sheds light on the importance of understanding the molecular mechanisms that regulate the kinase function.

Indexed as

Delphielectrostatic potentialJAK3MMPBSAphosphorylationtyrosine

Identifiers

PMID37109511
PMCPMC10141632
OpenAlexW4363673857

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.