Evidence map›Paper›PMID 37109428›Full record

ArticleLife (Basel, Switzerland)2023

Unbiased Quantitative Single-Cell Morphometric Analysis to Identify Microglia Reactivity in Developmental Brain Injury.

Mark St Pierre, Sarah Ann Duck, Michelle Nazareth, Camille Fung, Lauren L Jantzie, Raul Chavez-Valdez

Open access · goldAbstract read
In one paragraph

Article in Life (Basel, Switzerland), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Mark St PierreDivision of Neonatal-Perinatal Medicine, Department of Pediatrics, Johns Hopkins School of Medicine, Baltimore, MD 21287, USA.ORCID 0009-0009-3714-0545
Sarah Ann DuckDepartment of Molecular and Cellular Biology, Johns Hopkins University Krieger School of Arts and Sciences, Baltimore, MD 21205, USA.ORCID 0000-0002-3362-6021
Michelle NazarethDepartment of Molecular and Cellular Biology, Johns Hopkins University Krieger School of Arts and Sciences, Baltimore, MD 21205, USA.ORCID 0000-0003-1263-4177
Camille FungDivision of Neonatology, Department of Pediatrics, University of Utah, Salt Lake City, UT 84132, USA.
Lauren L JantzieDivision of Neonatal-Perinatal Medicine, Department of Pediatrics, Johns Hopkins School of Medicine, Baltimore, MD 21287, USA.
Raul Chavez-ValdezDivision of Neonatal-Perinatal Medicine, Department of Pediatrics, Johns Hopkins School of Medicine, Baltimore, MD 21287, USA.ORCID 0000-0002-0788-8028
Johns Hopkins University · USUniversity of Utah · US

Funding

MicroRNAs and Perinatal Hypoxia-IschemiaR01NS086945 · NINDS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI DIZON, MARIA LUZ VALDECANAS · 2015 to 2019
$1.7M
Placental Mediated Mechanisms of Perinatal Brain InjuryR01HL139492 · NHLBI · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI JANTZIE, LAUREN LEIGH COONEY · 2018 to 2021
$1.6M
Injury of Hippocampal Interneurons following Neonatal Hypoxia-Ischemia and Therapeutic HypothermiaK08NS096115 · NINDS · JOHNS HOPKINS UNIVERSITY · PI CHAVEZ-VALDEZ, RAUL · 2017 to 2021
$1.2M
Erythropoietin and Melatonin Combination Therapy for Perinatal Opioid-Induced Brain InjuryU18DA052402 · NIDA · JOHNS HOPKINS UNIVERSITY · PI JANTZIE, LAUREN LEIGH COONEY · 2020 to 2020
$246k
NHLBI NIH HHS R01 HL139492NIDA NIH HHS U18 DA052402NIH HHS R01HL139492, W81XWH2210461, W81XWH1810167, U18DA052402, KO8NS096115, RO1NS086945NINDS NIH HHS K08 NS096115NINDS NIH HHS R01 NS086945
6 · The paper itself

Abstract

Microglia morphological studies have been limited to the process of reviewing the most common characteristics of a group of cells to conclude the likelihood of a "pathological" milieu. We have developed an Imaris-software-based analytical pipeline to address selection and operator biases, enabling use of highly reproducible machine-learning algorithms to quantify at single-cell resolution differences between groups. We hypothesized that this analytical pipeline improved our ability to detect subtle yet important differences between groups. Thus, we studied the temporal changes in Iba1

Indexed as

3D renderingchorioamnionitisconvex hullImarisimmune cellsintrauterine growth restrictionmicroglianeonatal hypoxia–ischemiaSholl intersectionssphericity

Identifiers

PMID37109428
PMCPMC10147015
OpenAlexW4361301262

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.