Evidence map›Paper›PMID 37108914›Full record

ArticleJournal of fungi (Basel, Switzerland)2023

A Metagenomic Survey of Wood Decay Fungi in the Urban Trees of Singapore.

Yan Hong, Jhing Yein Tan, Huiyu Xue, Mei Lun Chow, Mohamed Ali, Arthur Ng, Abigail Leong, Jeb Yeo, Shao Ming Koh, Megan Shi Ying Tang and 9 more

Abstract read
In one paragraph

Article in Journal of fungi (Basel, Switzerland), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Review
  2. Review
  3. First Report ofPathogens (Basel, Switzerland) · 2025
    Article
  4. Article
  5. Review
  6. Locally IsolatedJournal of fungi (Basel, Switzerland) · 2023
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Yan HongSchool of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore 637551, Singapore.ORCID 0000-0002-2954-8788
Jhing Yein TanSchool of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore 637551, Singapore.ORCID 0000-0002-6231-7148
Huiyu XueNational Parks Board, 1 Cluny Road, Singapore Botanic Gardens, Singapore 259569, Singapore.
Mei Lun ChowSchool of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore 637551, Singapore.
Mohamed AliNational Parks Board, 1 Cluny Road, Singapore Botanic Gardens, Singapore 259569, Singapore.
Arthur NgNational Parks Board, 1 Cluny Road, Singapore Botanic Gardens, Singapore 259569, Singapore.
Abigail LeongNational Parks Board, 1 Cluny Road, Singapore Botanic Gardens, Singapore 259569, Singapore.
Jeb YeoNational Parks Board, 1 Cluny Road, Singapore Botanic Gardens, Singapore 259569, Singapore.
Shao Ming KohSchool of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore 637551, Singapore.
Megan Shi Ying TangSchool of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore 637551, Singapore.
Yan Yi LeeSchool of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore 637551, Singapore.
Amy Mei Fun ChoongDepartment of Biological Sciences, Faculty of Science, National University of Singapore, 14, Science Drive 4, Singapore 117543, Singapore.
Serena Mei Lyn LeeSingapore Botanic Gardens, Singapore 259569, Singapore.
Riccardo Delli PontiSchool of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore 637551, Singapore.
Perry M ChanSchool of Applied Science, Nanyang Polytechnic, 180 Ang Mo Kio Avenue 8, Singapore 569830, Singapore.
Daryl LeeNational Parks Board, 1 Cluny Road, Singapore Botanic Gardens, Singapore 259569, Singapore.
Jia Yih WongNational Parks Board, 1 Cluny Road, Singapore Botanic Gardens, Singapore 259569, Singapore.
Marek MutwilSchool of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore 637551, Singapore.ORCID 0000-0002-7848-0126
Yok King FongNational Parks Board, 1 Cluny Road, Singapore Botanic Gardens, Singapore 259569, Singapore.

Funding

Ministry of National Development NTU REF 2019-1120
6 · The paper itself

Abstract

Mature tropical urban trees are susceptible to root and trunk rot caused by pathogenic fungi. A metagenomic survey of such fungi was carried out on 210 soil and tissue samples collected from 134 trees of 14 common species in Singapore. Furthermore, 121 fruiting bodies were collected and barcoded. Out of the 22,067 OTUs (operational taxonomic units) identified, 10,646 OTUs had annotation information, and most were either ascomycetes (63.4%) or basidiomycetes (22.5%). Based on their detection in the diseased tissues and surrounding soils and/or the presence of fruiting bodies, fourteen basidiomycetes (nine

Indexed as

AngsanaFulvifomesGanodermain vitro wood decay studymetagenomicsPhellinus noxiusPolyporalesRain Treewood rotting fungiYellow Flame

Identifiers

PMID37108914
PMCPMC10145048

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.