Evidence map›Paper›PMID 37108688›Full record

ArticleInternational journal of molecular sciences2023

Multiple Nucleocapsid Structural Forms of Shrimp White Spot Syndrome Virus Suggests a Novel Viral Morphogenetic Pathway.

Hui-Ju Huang, Sen-Lin Tang, Yuan-Chih Chang, Hao-Ching Wang, Tze Hann Ng, Rees F Garmann, Yu-Wen Chen, Jiun-Yan Huang, Ramya Kumar, Sheng-Hsiung Chang and 10 more

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 9 institutions in 4 countries.

Hui-Ju HuangInstitute of Marine Biology, National Taiwan Ocean University, Keelung 20224, Taiwan.
Sen-Lin TangBiodiversity Research Center, Academia Sinica, Taipei 11529, Taiwan.
Yuan-Chih ChangInstitute of Biological Chemistry, Academia Sinica, Nankang, Taipei 115, Taiwan.ORCID 0000-0002-0289-3768
Hao-Ching WangInternational Center for the Scientific Development of Shrimp Aquaculture, National Cheng Kung University, Tainan 701, Taiwan.ORCID 0000-0003-2396-717X
Tze Hann NgInternational Center for the Scientific Development of Shrimp Aquaculture, National Cheng Kung University, Tainan 701, Taiwan.
Rees F GarmannDepartment of Chemistry and Biochemistry, San Diego State University, San Diego, CA 92182-1030, USA.
Yu-Wen ChenBiodiversity Research Center, Academia Sinica, Taipei 11529, Taiwan.
Jiun-Yan HuangInternational Center for the Scientific Development of Shrimp Aquaculture, National Cheng Kung University, Tainan 701, Taiwan.
Ramya KumarInternational Center for the Scientific Development of Shrimp Aquaculture, National Cheng Kung University, Tainan 701, Taiwan.
Sheng-Hsiung ChangInternational Center for the Scientific Development of Shrimp Aquaculture, National Cheng Kung University, Tainan 701, Taiwan.
Shang-Rung WuInstitute of Oral Medicine, National Cheng Kung University, Tainan 701, Taiwan.
Chih-Yu ChaoDepartment of Physics and Graduate Institute of Applied Physics, National Taiwan University, Taipei 10617, Taiwan.
Kyoko MatobaProtein Synthesis and Expression, Institute for Protein Research, Osaka University, Osaka 565-0871, Japan.
Iwasaki KenjiLife Science Center for Survival Dynamics, Tsukuba Advanced Research Alliance (TARA), University of Tsukuba, Tsukuba 305-8577, Japan.
William M GelbartDepartment of Chemistry and Biochemistry, University of California, Los Angeles, CA 90095-1569, USA.
Tzu-Ping KoInstitute of Biological Chemistry, Academia Sinica, Nankang, Taipei 115, Taiwan.ORCID 0000-0003-1794-2638
Hwei-Jiung Andrew WangInstitute of Biological Chemistry, Academia Sinica, Nankang, Taipei 115, Taiwan.
Chu-Fang LoInternational Center for the Scientific Development of Shrimp Aquaculture, National Cheng Kung University, Tainan 701, Taiwan.
Li-Li ChenInstitute of Marine Biology, National Taiwan Ocean University, Keelung 20224, Taiwan.ORCID 0000-0002-9593-8004
Han-Ching WangInternational Center for the Scientific Development of Shrimp Aquaculture, National Cheng Kung University, Tainan 701, Taiwan.ORCID 0000-0001-7283-4942
Institute of Biological Chemistry, Academia Sinica · TWNational Cheng Kung University · TWNational Taiwan Ocean University · TWBiodiversity Research Center, Academia Sinica · TWNational Taiwan University · TWTemasek Life Sciences Laboratory · SGUniversity of Tsukuba · JPSan Diego State University · USUniversity of California, Los Angeles · US

Funding

Academia Sinica Cryo-EM Center AS-CFII-111-210Ministry of Education MOE 106R880708Ministry of Science and Technology MOST 108-2314-B-006-096-MY3; MOST 108-2112-M-002-016-MY3; MOST 109-2634-F-006-022; MOST 110-2313-B-019-004-MY3National Science and Technology Council NSTC 111-2628-B-006-017Taiwan Protein Project AS-KPQ-109-TPP2; AS-KPQ-105-TPP
6 · The paper itself

Abstract

White spot syndrome virus (WSSV) is a very large dsDNA virus. The accepted shape of the WSSV virion has been as ellipsoidal, with a tail-like extension. However, due to the scarcity of reliable references, the pathogenesis and morphogenesis of WSSV are not well understood. Here, we used transmission electron microscopy (TEM) and cryogenic electron microscopy (Cryo-EM) to address some knowledge gaps. We concluded that mature WSSV virions with a stout oval-like shape do not have tail-like extensions. Furthermore, there were two distinct ends in WSSV nucleocapsids: a portal cap and a closed base. A C14 symmetric structure of the WSSV nucleocapsid was also proposed, according to our Cryo-EM map. Immunoelectron microscopy (IEM) revealed that VP664 proteins, the main components of the 14 assembly units, form a ring-like architecture. Moreover, WSSV nucleocapsids were also observed to undergo unique helical dissociation. Based on these new results, we propose a novel morphogenetic pathway of WSSV.

Indexed as

PenaeidaeWhite spot syndrome virus 1AnimalsMicroscopy, ElectronMicroscopy, ImmunoelectronNucleocapsidVirioncryogenic electron microscopylarge dsDNA virusnucleocapsidwhite spot syndrome virus

Identifiers

PMID37108688
PMCPMC10140842
OpenAlexW4366590238

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.